RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 NRSN2Q9GZP1 204 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 ACP6Q9NPH0 428 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 VANGL2Q9ULK5 521 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 HS3ST2Q9Y278 367 aa23.84■■□□□ 1.41
C9orf47-202ENST00000375850 NBEAQ8NFP9 2946 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 SYNJ2BP-COX16A0A087WUM0 186 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 PLK4O00444 970 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 CKMT2P17540 419 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 CNTN1Q12860 1018 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 DNAJC3Q13217 504 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 ARHGAP44Q17R89 818 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 OLFML1Q6UWY5 402 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 C1orf131Q8NDD1 294 aaKnown RBP23.83■■□□□ 1.41
C9orf47-202ENST00000375850 CRACR2AQ9BSW2 395 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 SYNCQ9H7C4 482 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 COX16Q9P0S2 106 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 SARDHQ9UL12 918 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 OR51B4Q9Y5P0 310 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 HS3ST4Q9Y661 456 aa23.83■■□□□ 1.41
C9orf47-202ENST00000375850 URB1O60287 2271 aaKnown RBP23.82■■□□□ 1.4
C9orf47-202ENST00000375850 PRKCSHP14314 528 aaPredicted RBP23.82■■□□□ 1.4
C9orf47-202ENST00000375850 KRT9P35527 623 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 ABCG1P45844 678 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 CLCN6P51797 869 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 SLC6A3Q01959 620 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 CENPCQ03188 943 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 NME3Q13232 169 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 RTP5Q14D33 572 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 BRMS1LQ5PSV4 323 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 OR6B2Q6IFH4 312 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 FBXL19Q6PCT2 694 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 FAM183BPQ6ZVS7 135 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 Q6ZVU0 165 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 KANSL1Q7Z3B3 1105 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 SPATS2Q86XZ4 545 aaKnown RBP23.82■■□□□ 1.4
C9orf47-202ENST00000375850 MUC3BQ9H195 1237 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 STAP1Q9ULZ2 295 aa23.82■■□□□ 1.4
C9orf47-202ENST00000375850 GOLGA4Q13439 2230 aaKnown RBP23.82■■□□□ 1.4
C9orf47-202ENST00000375850 FASNP49327 2511 aaKnown RBP23.81■■□□□ 1.4
C9orf47-202ENST00000375850 EIF4E1BA6NMX2 242 aaKnown RBP23.81■■□□□ 1.4
C9orf47-202ENST00000375850 M0QYT0 321 aa23.81■■□□□ 1.4
C9orf47-202ENST00000375850 PAGE1O75459 146 aa23.81■■□□□ 1.4
C9orf47-202ENST00000375850 SLC9A1P19634 815 aa23.81■■□□□ 1.4
C9orf47-202ENST00000375850 BPIFB4P59827 614 aa23.81■■□□□ 1.4
C9orf47-202ENST00000375850 BNIP3Q12983 259 aa23.81■■□□□ 1.4
C9orf47-202ENST00000375850 HS1BP3Q53T59 392 aa23.81■■□□□ 1.4
C9orf47-202ENST00000375850 HES3Q5TGS1 186 aa23.81■■□□□ 1.4
C9orf47-202ENST00000375850 GJB7Q6PEY0 223 aa23.81■■□□□ 1.4
C9orf47-202ENST00000375850 SETD3Q86TU7 594 aaPredicted RBP23.81■■□□□ 1.4
C9orf47-202ENST00000375850 TMIEQ8NEW7 156 aa23.81■■□□□ 1.4
C9orf47-202ENST00000375850 FAM174AQ8TBP5 190 aa23.81■■□□□ 1.4
C9orf47-202ENST00000375850 RFFLQ8WZ73 363 aa23.81■■□□□ 1.4
C9orf47-202ENST00000375850 KLHDC7BQ96G42 594 aa23.81■■□□□ 1.4
C9orf47-202ENST00000375850 LAMA5O15230 3695 aa23.8■■□□□ 1.4
C9orf47-202ENST00000375850 GRAP2O75791 330 aa23.8■■□□□ 1.4
C9orf47-202ENST00000375850 F9P00740 461 aa23.8■■□□□ 1.4
C9orf47-202ENST00000375850 ACP1P24666 158 aa23.8■■□□□ 1.4
C9orf47-202ENST00000375850 MAT2AP31153 395 aaKnown RBP23.8■■□□□ 1.4
C9orf47-202ENST00000375850 METAP1P53582 386 aa23.8■■□□□ 1.4
C9orf47-202ENST00000375850 E2F1Q01094 437 aa23.8■■□□□ 1.4
C9orf47-202ENST00000375850 TARDBPQ13148 414 aaKnown RBP eCLIP23.8■■□□□ 1.4
C9orf47-202ENST00000375850 LRRC69Q6ZNQ3 347 aa23.8■■□□□ 1.4
C9orf47-202ENST00000375850 PASD1Q8IV76 773 aa23.8■■□□□ 1.4
C9orf47-202ENST00000375850 PGAP3Q96FM1 320 aaPredicted RBP23.8■■□□□ 1.4
C9orf47-202ENST00000375850 WDCPQ9H6R7 721 aa23.8■■□□□ 1.4
C9orf47-202ENST00000375850 DYRK4Q9NR20 520 aa23.8■■□□□ 1.4
C9orf47-202ENST00000375850 ARHGEF38Q9NXL2 777 aa23.8■■□□□ 1.4
C9orf47-202ENST00000375850 KNTC1P50748 2209 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 CBX4O00257 560 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 RRP8O43159 456 aaKnown RBP23.79■■□□□ 1.4
C9orf47-202ENST00000375850 PRNPP04156 253 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 RHOCP08134 193 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 SRCP12931 536 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 PON1P27169 355 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 SCNN1AP37088 669 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 ZNF211Q13398 564 aaPredicted RBP23.79■■□□□ 1.4
C9orf47-202ENST00000375850 LRRC31Q6UY01 552 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 CREBRFQ8IUR6 639 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 DCAF4L2Q8NA75 395 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 ATP11CQ8NB49 1132 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 TMEM145Q8NBT3 493 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 OR52K2Q8NGK3 314 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 BAP1Q92560 729 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 AK5Q9Y6K8 562 aa23.79■■□□□ 1.4
C9orf47-202ENST00000375850 ERBB2P04626 1255 aa23.78■■□□□ 1.4
C9orf47-202ENST00000375850 CHRNA3P32297 505 aa23.78■■□□□ 1.4
C9orf47-202ENST00000375850 CXCR3P49682 368 aa23.78■■□□□ 1.4
C9orf47-202ENST00000375850 PROX2Q3B8N5 592 aa23.78■■□□□ 1.4
C9orf47-202ENST00000375850 PIP5KL1Q5T9C9 394 aa23.78■■□□□ 1.4
C9orf47-202ENST00000375850 PPP1R16AQ96I34 528 aa23.78■■□□□ 1.4
C9orf47-202ENST00000375850 C1orf74Q96LT6 269 aa23.78■■□□□ 1.4
C9orf47-202ENST00000375850 DCBLD2Q96PD2 775 aa23.78■■□□□ 1.4
C9orf47-202ENST00000375850 NPY6RQ99463 290 aa23.78■■□□□ 1.4
C9orf47-202ENST00000375850 SIK2Q9H0K1 926 aa23.78■■□□□ 1.4
C9orf47-202ENST00000375850 KLHL11Q9NVR0 708 aa23.78■■□□□ 1.4
C9orf47-202ENST00000375850 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.78■■□□□ 1.4
C9orf47-202ENST00000375850 KIAA1468Q9P260 1216 aa23.78■■□□□ 1.4
C9orf47-202ENST00000375850 NYNRINQ9P2P1 1898 aaKnown RBP23.77■■□□□ 1.4
C9orf47-202ENST00000375850 AKT2P31751 481 aa23.77■■□□□ 1.4
C9orf47-202ENST00000375850 EIF2S3P41091 472 aaKnown RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms