RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SOX6P35712 828 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 CDKN2BP42772 138 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 CLK2P49760 499 aaKnown RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 BFSP2Q13515 415 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 POLD3Q15054 466 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 ANKS3Q6ZW76 656 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 PQLC1Q8N2U9 271 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 PAWRQ96IZ0 340 aaKnown RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 OMDQ99983 421 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 UGT2B28Q9BY64 529 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 ST6GALNAC4Q9H4F1 302 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 PCDH18Q9HCL0 1135 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 RNF19AQ9NV58 838 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 MPP6Q9NZW5 540 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 NOCTQ9UK39 431 aaKnown RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 C2orf71A6NGG8 1288 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 TGDSO95455 350 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 RHOCP08134 193 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 LTA4HP09960 611 aaKnown RBP11.71□□□□□ -0.53
PTCH1-203ENST00000375274 OCM2P0CE71 109 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 OCMP0CE72 109 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-203ENST00000375274 NEK3P51956 506 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 BNIPLQ7Z465 357 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 ITFG1Q8TB96 612 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 MAGEE2Q8TD90 523 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-203ENST00000375274 KCTD4Q8WVF5 259 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 ALG9Q9H6U8 611 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 SPAG4Q9NPE6 437 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 ZDHHC18Q9NUE0 388 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 XPR1Q9UBH6 696 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 ANAPC2Q9UJX6 822 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 CHKBQ9Y259 395 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 CABYRO75952 493 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 ERCC2P18074 760 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 HOXD10P28358 340 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 TBX4P57082 545 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 HIST2H2ACQ16777 129 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-203ENST00000375274 SLC5A9Q2M3M2 681 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 RNASEH2BQ5TBB1 312 aaKnown RBP11.71□□□□□ -0.53
PTCH1-203ENST00000375274 HIST2H2AA3Q6FI13 130 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 TDRPQ86YL5 185 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 SLC44A2Q8IWA5 706 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-203ENST00000375274 C12orf29Q8N999 325 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 ANKRD52Q8NB46 1076 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 SERPINB11Q96P15 392 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 CPXM1Q96SM3 734 aa11.71□□□□□ -0.53
PTCH1-203ENST00000375274 HBS1LQ9Y450 684 aaKnown RBP11.71□□□□□ -0.53
PTCH1-203ENST00000375274 MRPL42Q9Y6G3 142 aaKnown RBP11.71□□□□□ -0.53
PTCH1-203ENST00000375274 KPNA4O00629 521 aaPredicted RBP11.71□□□□□ -0.54
PTCH1-203ENST00000375274 SPTLC1O15269 473 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 HS6ST1O60243 411 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 VPS4BO75351 444 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 CPSF4O95639 269 aaKnown RBP11.71□□□□□ -0.54
PTCH1-203ENST00000375274 HSMCR30P0CW71 290 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 UQCRBP14927 111 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 OR1E1P30953 314 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 SERPINH1P50454 418 aaKnown RBP11.71□□□□□ -0.54
PTCH1-203ENST00000375274 XIAPP98170 497 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 CTXN3Q4LDR2 81 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 LIPMQ5VYY2 423 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 RBM44Q6ZP01 1051 aaKnown RBP11.71□□□□□ -0.54
PTCH1-203ENST00000375274 PLEKHH3Q7Z736 793 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 SLC41A1Q8IVJ1 513 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 B3GALNT2Q8NCR0 500 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 CLPTM1LQ96KA5 538 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 LHX5Q9H2C1 402 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 BCL9LQ86UU0 1499 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 BTN3A1O00481 513 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 CCNT2O60583 730 aaKnown RBP11.71□□□□□ -0.54
PTCH1-203ENST00000375274 GUCA1CO95843 209 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 PTPRAP18433 802 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 PIK3R1P27986 724 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 RHOAP61586 193 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 PWP1Q13610 501 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 TAF5Q15542 800 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 PFKFB4Q16877 469 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 RNF220Q5VTB9 566 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 CROCCP3Q8IVE0 287 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 FNIP1Q8TF40 1166 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 C7orf26Q96N11 449 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 TMCC3Q9ULS5 477 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 STXBP5LQ9Y2K9 1186 aa11.71□□□□□ -0.54
PTCH1-203ENST00000375274 MRC1P22897 1456 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 MGAT4DA6NG13 374 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 CCNE2O96020 404 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 NPR3P17342 541 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 PTPN1P18031 435 aaKnown RBP11.7□□□□□ -0.54
PTCH1-203ENST00000375274 MSH3P20585 1137 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 TKTP29401 623 aaKnown RBP11.7□□□□□ -0.54
PTCH1-203ENST00000375274 CYP1B1Q16678 543 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 KHDC1Q4VXA5 237 aaKnown RBP11.7□□□□□ -0.54
PTCH1-203ENST00000375274 AMIGO2Q86SJ2 522 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 DDX53Q86TM3 631 aaKnown RBP11.7□□□□□ -0.54
PTCH1-203ENST00000375274 LPCAT1Q8NF37 534 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 WDR60Q8WVS4 1066 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 PTCD3Q96EY7 689 aaKnown RBP11.7□□□□□ -0.54
PTCH1-203ENST00000375274 PIDD1Q9HB75 910 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 VPS28Q9UK41 221 aa11.7□□□□□ -0.54
PTCH1-203ENST00000375274 PSMD13Q9UNM6 376 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms