RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ANXA9O76027 345 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 USP1O94782 785 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 RPL17P18621 184 aaKnown RBP18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 DSG1Q02413 1049 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 MGAT5Q09328 741 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 DNAJC3Q13217 504 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 KIAA1841Q6NSI8 718 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 KLHDC10Q6PID8 442 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 LVRNQ6Q4G3 990 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TMEM135Q86UB9 458 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CMTR2Q8IYT2 770 aaKnown RBP18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ANKS4BQ8N8V4 417 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ZNF419Q96HQ0 510 aaPredicted RBP18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 IL22Q9GZX6 179 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ZMYND15Q9H091 742 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CCSER2Q9H7U1 834 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 PIH1D1Q9NWS0 290 aaKnown RBP18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ZNF212Q9UDV6 495 aa18.37■□□□□ 0.53
HLA-DQB1-201ENST00000374943 GOLGA6L7A0A1B0GV03 622 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 FAM237BA0A1B0GVD1 139 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 UGT1A9O60656 530 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 LPXNO60711 386 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 DHRS4L1P0CG22 281 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 GJA8P48165 433 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CORO7P57737 925 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CDH17Q12864 832 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 OLIG2Q13516 323 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 FBXL22Q6P050 247 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CCDC117Q8IWD4 279 aaPredicted RBP18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 DNAAF3Q8N9W5 541 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ZNF461Q8TAF7 563 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 USP33Q8TEY7 942 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ARMC5Q96C12 935 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 GRAMD1AQ96CP6 724 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 PAIP2Q9BPZ3 127 aaKnown RBP18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ELAC2Q9BQ52 826 aaKnown RBP18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 RETREG1Q9H6L5 497 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 UGT1A7Q9HAW7 530 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 UGT1A10Q9HAW8 530 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 UGT1A8Q9HAW9 530 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 IPO11Q9UI26 975 aaKnown RBP18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 RPS6KL1Q9Y6S9 549 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 DENND4CQ5VZ89 1909 aa18.36■□□□□ 0.53
HLA-DQB1-201ENST00000374943 GOLGA8RI6L899 631 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 USP12O75317 370 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 RFPL1O75677 317 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 KIAA0754O94854 1291 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 PEX11BO96011 259 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 PYGBP11216 843 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 LAG3P18627 525 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ETV4P43268 484 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 GEMP55040 296 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TNK2Q07912 1038 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 C5orf22Q49AR2 442 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ALFQ53S48 1182 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 RAP1GAP2Q684P5 730 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 OTOP3Q7RTS5 596 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 IGSF8Q969P0 613 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CERS2Q96G23 380 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 MYRFLQ96LU7 910 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 KLF6Q99612 283 aaPredicted RBP18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 VPS11Q9H270 941 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 C11orf49Q9H6J7 331 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 DNMT3LQ9UJW3 386 aa18.35■□□□□ 0.53
HLA-DQB1-201ENST00000374943 HMX2A2RU54 273 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CNTN5O94779 1100 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SEC24AO95486 1093 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TIMP1P01033 207 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 HLA-DQB2P05538 268 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 HMGA1P17096 107 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ADRA1DP25100 572 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ATP5C1P36542 298 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 MAPKAPK2P49137 400 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 IFT88Q13099 833 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 HNRNPDQ14103 355 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SEPT7Q16181 437 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 FBXO46Q6PJ61 603 aaPredicted RBP18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 PACS1Q6VY07 963 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 CHSY1Q86X52 802 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 UNC5BQ8IZJ1 945 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TRMT2BQ96GJ1 504 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TMEM169Q96HH4 297 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SOX13Q9UN79 622 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 MAGED2Q9UNF1 606 aaPredicted RBP18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ZNF840PA6NDX5 716 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 COPEO14579 308 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 LRRC26Q2I0M4 334 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ANKRD20A4Q4UJ75 823 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SPOUT1Q5T280 376 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ARMC3Q5W041 872 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 NADSYN1Q6IA69 706 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 LRRC8CQ8TDW0 803 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 ZNF669Q96BR6 464 aaPredicted RBP18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 HMCESQ96FZ2 354 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 FCRL3Q96P31 734 aaPredicted RBP18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 TBL1YQ9BQ87 522 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 RBM22Q9NW64 420 aaKnown RBP eCLIP18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 SLC17A7Q9P2U7 560 aa18.34■□□□□ 0.53
HLA-DQB1-201ENST00000374943 USP15Q9Y4E8 981 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms