RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ACOX2Q99424 681 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 DYRK1BQ9Y463 629 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 MYH3P11055 1940 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 FARP2O94887 1054 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ETS1P14921 441 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 AKAP5P24588 427 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 FEN1P39748 380 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 CAPSQ13938 189 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ZNF268Q14587 947 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 TAB1Q15750 504 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 MIIPQ5JXC2 388 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 SPANXN3Q5MJ09 141 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ZNF280DQ6N043 979 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ZNF544Q6NX49 715 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ARMC6Q6NXE6 501 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ABHD15Q6UXT9 468 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 OOSP2Q86WS3 158 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 SPPL2AQ8TCT8 520 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 RIPK3Q9Y572 518 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 DUOX1Q9NRD9 1551 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 A0A096LPK6 155 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 SMIM31A0A1B0GVY4 71 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 CCDC154A6NI56 674 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 DDX3XO00571 662 aaKnown RBP eCLIP12.48□□□□□ -0.414e-9■■■□□ 15.9
NPLOC4-202ENST00000374747 EGFRP00533 1210 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 CHN2P52757 468 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 OXCT1P55809 520 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 CNGA2Q16280 664 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 CTXN3Q4LDR2 81 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 KYAT3Q6YP21 454 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 KCNMB4Q86W47 210 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 DNAAF5Q86Y56 855 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ZDHHC17Q8IUH5 632 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 EPHX4Q8IUS5 362 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 AGAP11Q8TF27 550 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 FNIP1Q8TF40 1166 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 UBASH3BQ8TF42 649 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 TBCBQ99426 244 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 LIMD1Q9UGP4 676 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 PADI4Q9UM07 663 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ADRA1DP25100 572 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 TKTP29401 623 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 GSTT1P30711 240 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 FLT3P36888 993 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 NAB1Q13506 487 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ARSHQ5FYA8 562 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 TTC27Q6P3X3 843 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 PTAR1Q7Z6K3 402 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 MCRS1Q96EZ8 462 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 SYT15Q9BQS2 421 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 GGA2Q9UJY4 613 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 VPS4BO75351 444 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ZBTB48P10074 688 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 DARSP14868 501 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 MSH3P20585 1137 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 HALP42357 657 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 HK2P52789 917 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 UGCGQ16739 394 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 TTMPQ5BVD1 217 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 CAPN10Q9HC96 672 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 DDX43Q9NXZ2 648 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 TSPAN16Q9UKR8 245 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 DOLKQ9UPQ8 538 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 WDR27A2RRH5 827 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 TRIM43BA6NCK2 446 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 PTGES3LE9PB15 166 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 SMIM10L2AP0DMW4 78 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 SMIM10L2BP0DMW5 78 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 PPP2R1BP30154 601 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ZDHHC13Q8IUH4 622 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 FAM126BQ8IXS8 530 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ZCCHC9Q8N567 271 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 FNDC5Q8NAU1 212 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 ZSWIM2Q8NEG5 633 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 PYDC1Q8WXC3 89 aa12.48□□□□□ -0.41
NPLOC4-202ENST00000374747 DYTNA2CJ06 578 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 CASTOR2A6NHX0 329 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 SNX3O60493 162 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ALDH2P05091 517 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 EIF4BP23588 611 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 TNFRSF8P28908 595 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 FAAP100Q0VG06 881 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ERMARDQ5T6L9 678 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ZNF618Q5T7W0 954 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 C12orf56Q8IXR9 622 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ANKRD49Q8WVL7 239 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 WDR60Q8WVS4 1066 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 CKAP2Q8WWK9 683 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 RIBC2Q9H4K1 309 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 UBA2Q9UBT2 640 aaPredicted RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 SORCS3Q9UPU3 1222 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 LTBP3Q9NS15 1303 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 UNC5CO95185 931 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ADRB2P07550 413 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 SP3Q02447 781 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 NET1Q7Z628 596 aaPredicted RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 SYTL1Q8IYJ3 562 aa12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 RTL3Q8N8U3 475 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ZSCAN18Q8TBC5 510 aaPredicted RBP12.47□□□□□ -0.41
NPLOC4-202ENST00000374747 ACO2Q99798 780 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms