RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 TMEM41AQ96HV5 264 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ZNF578Q96N58 590 aaPredicted RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 POLR1EQ9GZS1 481 aaKnown RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 FN3KQ9H479 309 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 PAQR5Q9NXK6 330 aaPredicted RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 PHTF1Q9UMS5 762 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ZFR2Q9UPR6 939 aaKnown RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 USP19O94966 1318 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 POLR1CO15160 346 aaPredicted RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ZBTB24O43167 697 aaPredicted RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ADH1CP00326 375 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 KCNJ5P48544 419 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 P4HA3Q7Z4N8 544 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ATG16L2Q8NAA4 619 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 MCPH1Q8NEM0 835 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 LRRC40Q9H9A6 602 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 PANK4Q9NVE7 773 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 KERAO60938 352 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 LIMK1P53667 647 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 NFX1Q12986 1120 aaKnown RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 MXD4Q14582 209 aaPredicted RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 NKAPLQ5M9Q1 402 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 OTUD7BQ6GQQ9 843 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 SATL1Q86VE3 508 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 AADATQ8N5Z0 425 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 FAR1Q8WVX9 515 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ACOT11Q8WXI4 607 aaPredicted RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 NXNL1Q96CM4 212 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 CIB1Q99828 191 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ZNF251Q9BRH9 671 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 NPLQ9BXD5 320 aaPredicted RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ABCD2Q9UBJ2 740 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 COG5Q9UP83 839 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 MTMR6Q9Y217 621 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 REM1O75628 298 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 CHRNA5P30532 468 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 TBX2Q13207 712 aaPredicted RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ZBTB6Q15916 424 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 PAPD7Q5XG87 772 aaKnown RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ZNF561Q8N587 486 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 TMEM35BQ8NCS4 154 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 SERPINB11Q96P15 392 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 RPRD1AQ96P16 312 aaPredicted RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ZNF347Q96SE7 839 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 KCTD15Q96SI1 283 aaPredicted RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 DPYSL5Q9BPU6 564 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 NDST4Q9H3R1 872 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 LY9Q9HBG7 655 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ADAM28Q9UKQ2 775 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 FAM50BQ9Y247 325 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 TTLL1O95922 423 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 DDR2Q16832 855 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 LCN1P1Q5VSP4 162 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 IFNEQ86WN2 208 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 BTN2A2Q8WVV5 523 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 FCGR1BQ92637 280 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 TRIM2Q9C040 744 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 ZNF222Q9UK12 451 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 KDM5AP29375 1690 aaKnown RBP8.89□□□□□ -0.99
ABCA1-202ENST00000374736 EFCAB5A4FU69 1503 aa8.89□□□□□ -0.99
ABCA1-202ENST00000374736 SULT1C2O00338 296 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 DDX3XO00571 662 aaKnown RBP eCLIP8.88□□□□□ -0.991e-9■■□□□ 13.1
ABCA1-202ENST00000374736 SNAPINO95295 136 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 C9P02748 559 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 PNMA1Q8ND90 353 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 OR14K1Q8NGZ2 314 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 PTCHD1Q96NR3 888 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 FUZQ9BT04 418 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 MOCS1Q9NZB8 636 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 AP4B1Q9Y6B7 739 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 FCHO1O14526 889 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 CPNE3O75131 537 aaKnown RBP8.88□□□□□ -0.99
ABCA1-202ENST00000374736 ITIH2P19823 946 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 RPS6KB1P23443 525 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 SMARCB1Q12824 385 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 ESR2Q92731 530 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 AP2M1Q96CW1 435 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 TBC1D10AQ9BXI6 508 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 TLR7Q9NYK1 1049 aaKnown RBP8.88□□□□□ -0.99
ABCA1-202ENST00000374736 HSPB11Q9Y547 144 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 CAPN14A8MX76 684 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 CLK3P49761 638 aaKnown RBP8.88□□□□□ -0.99
ABCA1-202ENST00000374736 BCAR1P56945 870 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 HSPA14Q0VDF9 509 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 SLX4IPQ5VYV7 408 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 KCT2Q8NC54 265 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 ADAM32Q8TC27 787 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 SPACA7Q96KW9 195 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 C3orf14Q9HBI5 128 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 PIH1D1Q9NWS0 290 aaKnown RBP8.88□□□□□ -0.99
ABCA1-202ENST00000374736 FAM53CQ9NYF3 392 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 PLIN3O60664 434 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 ATPAF1Q5TC12 328 aaPredicted RBP8.88□□□□□ -0.99
ABCA1-202ENST00000374736 EFL1Q7Z2Z2 1120 aaKnown RBP8.88□□□□□ -0.99
ABCA1-202ENST00000374736 RBFAQ8N0V3 343 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 ADPRHL1Q8NDY3 354 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 TPCN2Q8NHX9 752 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 TMEM203Q969S6 136 aa8.88□□□□□ -0.99
ABCA1-202ENST00000374736 PBDC1Q9BVG4 233 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms