RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 SYT13Q7L8C5 426 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 ARHGAP12Q8IWW6 846 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 ALLCQ8N6M5 410 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 UBL4BQ8N7F7 174 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 DTWD2Q8NBA8 298 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 TXNDC5Q8NBS9 432 aaKnown RBP11.63□□□□□ -0.55
HSPG2-202ENST00000374676 SORCS1Q8WY21 1168 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
HSPG2-202ENST00000374676 MYO19Q96H55 970 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 RBM41Q96IZ5 413 aaKnown RBP11.63□□□□□ -0.55
HSPG2-202ENST00000374676 MRGPRX3Q96LB0 322 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 ACOX2Q99424 681 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 SPON2Q9BUD6 331 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 MAK16Q9BXY0 300 aaKnown RBP11.63□□□□□ -0.55
HSPG2-202ENST00000374676 SLC39A8Q9C0K1 460 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 KCND1Q9NSA2 647 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 VPS51Q9UID3 782 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 EFR3BQ9Y2G0 817 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 SHROOM3Q8TF72 1996 aa11.63□□□□□ -0.55
HSPG2-202ENST00000374676 MUC22E2RYF6 1773 aaPredicted RBP11.62□□□□□ -0.55
HSPG2-202ENST00000374676 NYNRINQ9P2P1 1898 aaKnown RBP11.62□□□□□ -0.55
HSPG2-202ENST00000374676 ZSCAN5CA6NGD5 496 aaPredicted RBP11.62□□□□□ -0.55
HSPG2-202ENST00000374676 ARHGAP42A6NI28 874 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 SGK1O00141 431 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 DDX3YO15523 660 aaKnown RBP11.62□□□□□ -0.55
HSPG2-202ENST00000374676 SNAP91O60641 907 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 ADAM23O75077 832 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 ZFXP17010 805 aaPredicted RBP11.62□□□□□ -0.55
HSPG2-202ENST00000374676 PTPN7P35236 360 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 NNMTP40261 264 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 IL12RB1P42701 662 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 CTSOP43234 321 aaPredicted RBP11.62□□□□□ -0.55
HSPG2-202ENST00000374676 CXCL12P48061 93 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 CCR3P51677 355 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 ST8SIA6P61647 398 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 TFDP2Q14188 446 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 PPP2R5EQ16537 467 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 HS1BP3Q53T59 392 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 SLC9A4Q6AI14 798 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 IL31Q6EBC2 164 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 LRRC49Q8IUZ0 686 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 CHPFQ8IZ52 775 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 CCDC33Q8N5R6 958 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 NPWQ8N729 165 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 CYB5D2Q8WUJ1 264 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 ALG3Q92685 438 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 HMCESQ96FZ2 354 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 CELF6Q96J87 481 aaKnown RBP11.62□□□□□ -0.55
HSPG2-202ENST00000374676 TMEM245Q9H330 911 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 TRMT1Q9NXH9 659 aaKnown RBP11.62□□□□□ -0.55
HSPG2-202ENST00000374676 CACNA2D2Q9NY47 1150 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 SUN2Q9UH99 717 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 SLCO3A1Q9UIG8 710 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 SLC25A13Q9UJS0 675 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 HPCAL4Q9UM19 191 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 HS3ST2Q9Y278 367 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 MFHAS1Q9Y4C4 1052 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 STON1Q9Y6Q2 735 aa11.62□□□□□ -0.55
HSPG2-202ENST00000374676 hCG_1818297A0A087WSY0 165 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 TARSL2A2RTX5 802 aaKnown RBP11.61□□□□□ -0.55
HSPG2-202ENST00000374676 WASH3PC4AMC7 463 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 CBX4O00257 560 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 ATP9BO43861 1147 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 CD160O95971 181 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 MT-CO1P00395 513 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 GLDCP23378 1020 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 CETN2P41208 172 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 PAPOLAP51003 745 aaKnown RBP11.61□□□□□ -0.55
HSPG2-202ENST00000374676 CLCN6P51797 869 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 DGKEP52429 567 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 GEMIN4P57678 1058 aaKnown RBP11.61□□□□□ -0.55
HSPG2-202ENST00000374676 ARF5P84085 180 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 RPS6KA1Q15418 735 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 CRY1Q16526 586 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 FNDC3BQ53EP0 1204 aaKnown RBP11.61□□□□□ -0.55
HSPG2-202ENST00000374676 INO80DQ53TQ3 878 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-202ENST00000374676 TFDP3Q5H9I0 405 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 NCBP2-AS2Q69YL0 99 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 SERPINA13PQ6UXR4 307 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 METTL3Q86U44 580 aaKnown RBP11.61□□□□□ -0.55
HSPG2-202ENST00000374676 C1orf210Q8IVY1 113 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 SH2D3CQ8N5H7 860 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 PLD5Q8N7P1 536 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-202ENST00000374676 CASKIN2Q8WXE0 1202 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 RPL10LQ96L21 214 aaKnown RBP11.61□□□□□ -0.55
HSPG2-202ENST00000374676 ZDHHC4Q9NPG8 344 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 SPATA6Q9NWH7 488 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-202ENST00000374676 PACSIN2Q9UNF0 486 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-202ENST00000374676 RAD54BQ9Y620 910 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 MUC6Q6W4X9 2439 aa11.61□□□□□ -0.55
HSPG2-202ENST00000374676 A0A1W2PQF6 199 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 USP27XA6NNY8 438 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 APOL1O14791 398 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 KIF5CO60282 957 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 PRAMEF11O60813 436 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 C7P10643 843 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 PYGMP11217 842 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 SRCP12931 536 aa11.6□□□□□ -0.55
HSPG2-202ENST00000374676 HOXB2P14652 356 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms