RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 SLC2A13Q96QE2 648 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 VAT1Q99536 393 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 MCMBPQ9BTE3 642 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 EPB41L1Q9H4G0 881 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 CDHR5Q9HBB8 845 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 ZNF358Q9NW07 568 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 VTI1BQ9UEU0 232 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 SMIM31A0A1B0GVY4 71 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 MATN2O00339 956 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 HDAC3O15379 428 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 CREB3O43889 395 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 C2P06681 752 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 FAM163BP0C2L3 166 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 DARSP14868 501 aaKnown RBP18.3■□□□□ 0.52
PHF1-201ENST00000374512 LMO2P25791 158 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 PEX2P28328 305 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 ZNF135P52742 658 aaPredicted RBP18.3■□□□□ 0.52
PHF1-201ENST00000374512 AQP4P55087 323 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 PPIDQ08752 370 aaKnown RBP18.3■□□□□ 0.52
PHF1-201ENST00000374512 ADIGQ0VDE8 80 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 SCAPQ12770 1279 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 USP4Q13107 963 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 CNPY1Q3B7I2 92 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 SLC9B1Q4ZJI4 515 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 KCTD11Q693B1 232 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 ITPRIPL1Q6GPH6 555 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 CES3Q6UWW8 571 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 NAPRTQ6XQN6 538 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 CATSPER1Q8NEC5 780 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 IL22Q9GZX6 179 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 DRC3Q9H069 523 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 Q9H521 79 aa18.3■□□□□ 0.52
PHF1-201ENST00000374512 ANKRD33BA6NCL7 494 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 M0QYT0 321 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 RTN3O95197 1032 aaPredicted RBP18.29■□□□□ 0.52
PHF1-201ENST00000374512 AKAP5P24588 427 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 AXLP30530 894 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 TAF6P49848 677 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 MPP3Q13368 585 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 SV2CQ496J9 727 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 IQSEC1Q6DN90 963 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 DNAAF3Q8N9W5 541 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 KYQ8NBH2 561 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 LENG8Q96PV6 779 aaPredicted RBP18.29■□□□□ 0.52
PHF1-201ENST00000374512 HAPLN3Q96S86 360 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 TINF2Q9BSI4 451 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 CEP41Q9BYV8 373 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 RNF19AQ9NV58 838 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 GJD2Q9UKL4 321 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 NRCAMQ92823 1304 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 SMIM28A0A1B0GU29 152 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 SMIM35A0A1B0GVV1 85 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 E9PBE3 544 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 DENRO43583 198 aaKnown RBP18.29■□□□□ 0.52
PHF1-201ENST00000374512 KLHL41O60662 606 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 CABYRO75952 493 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 CYP2B6P20813 491 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 CSRP3P50461 194 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 RPL14P50914 215 aaKnown RBP18.29■□□□□ 0.52
PHF1-201ENST00000374512 CHN2P52757 468 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 HERC3Q15034 1050 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 TCHHL1Q5QJ38 904 aaPredicted RBP18.29■□□□□ 0.52
PHF1-201ENST00000374512 ZYG11AQ6WRX3 759 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 PQLC1Q8N2U9 271 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 TSNARE1Q96NA8 513 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 GATA5Q9BWX5 397 aaPredicted RBP18.29■□□□□ 0.52
PHF1-201ENST00000374512 SHCBP1LQ9BZQ2 653 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 GBA3Q9H227 469 aa18.29■□□□□ 0.52
PHF1-201ENST00000374512 HUS1O60921 280 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 COL6A2P12110 1019 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 WARSP23381 471 aaKnown RBP18.28■□□□□ 0.52
PHF1-201ENST00000374512 ADRA1BP35368 520 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 POLD2P49005 469 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 PRKAA1Q13131 559 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 PDK3Q15120 406 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 LRRC36Q1X8D7 754 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 ANO4Q32M45 955 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 LIPMQ5VYY2 423 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 SEL1L3Q68CR1 1132 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 KCNMB4Q86W47 210 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 B3GALNT2Q8NCR0 500 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 GORASP1Q9BQQ3 440 aa18.28■□□□□ 0.52
PHF1-201ENST00000374512 SPTLC1O15269 473 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 PSMD3O43242 534 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 FBXO21O94952 628 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 SMIM10L2AP0DMW4 78 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 SMIM10L2BP0DMW5 78 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 KCNE1P15382 129 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 NPR3P17342 541 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 PIK3R1P27986 724 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 ALDH1A3P47895 512 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 FKBP1BP68106 108 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 SEMA3BQ13214 749 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 HSP90AA5PQ58FG0 334 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 PLEKHH3Q7Z736 793 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 MARVELD2Q8N4S9 558 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 TOP6BLQ8N6T0 577 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 AGAP2Q99490 1192 aa18.27■□□□□ 0.52
PHF1-201ENST00000374512 PARK7Q99497 189 aaKnown RBP18.27■□□□□ 0.52
PHF1-201ENST00000374512 GPR22Q99680 433 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms