RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 NUMBP49757 651 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 GTF2A2P52657 109 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 RBP5P82980 135 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 PDK1Q15118 436 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 C6orf52Q5T4I8 152 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 PQLC1Q8N2U9 271 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 E2F7Q96AV8 911 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 RNF157Q96PX1 679 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 CNPY3Q9BT09 278 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 DHRS4Q9BTZ2 278 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 SMYD2Q9NRG4 433 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 CDH22Q9UJ99 828 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 TIMM13Q9Y5L4 95 aaPredicted RBP17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 OTOFQ9HC10 1997 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 SIP14410 1827 aa17.66■□□□□ 0.42
LDLRAP1-201ENST00000374338 SF3B1O75533 1304 aaKnown RBP eCLIP17.65■□□□□ 0.422e-6■■■■■ 107.5
LDLRAP1-201ENST00000374338 MEIS3P2A8K0S8 358 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 CXCL11O14625 94 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 MCF2P10911 925 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 CDH3P22223 829 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 MRPS5P82675 430 aaKnown RBP17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 TRIML2Q8N7C3 387 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 RNF169Q8NCN4 708 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 GPRC5AQ8NFJ5 357 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 DNAJB3Q8WWF6 145 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 LGMNQ99538 433 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 DOCK3Q8IZD9 2030 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 GOLGA8TH3BQL2 631 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 SDC4P31431 198 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 NDUFV1P49821 464 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 AFF1P51825 1210 aaKnown RBP17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 BEX3Q00994 111 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 MROH9Q5TGP6 573 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 SH2D5Q6ZV89 423 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 DEFB107AQ8IZN7 70 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 GALNT4Q8N4A0 578 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 ERLEC1Q96DZ1 483 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 GNEQ9Y223 722 aaKnown RBP17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 CCDC78A2IDD5 438 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 SERPINA6P08185 405 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 AOC1P19801 751 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 EPHX2P34913 555 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 ALDH3B2P48448 385 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 C16orf46Q6P387 395 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 CASC4Q6P4E1 433 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 NUDCD3Q8IVD9 361 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 TSPAN14Q8NG11 270 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 OR6J1Q8NGC5 347 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 CLIP3Q96DZ5 547 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 RSAD1Q9HA92 442 aa17.65■□□□□ 0.42
LDLRAP1-201ENST00000374338 GAS2O43903 313 aaKnown RBP17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 RECQL4O94761 1208 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 CYP2C9P11712 490 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 LAMC2Q13753 1193 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 NOMO1Q15155 1222 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 KLHL38Q2WGJ6 581 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 OGFOD2Q6N063 350 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 DCLRE1AQ6PJP8 1040 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 SPNS2Q8IVW8 549 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 RNF148Q8N7C7 305 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 GRIN3AQ8TCU5 1115 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 SLC2A14Q8TDB8 520 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 PLEKHA8Q96JA3 519 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 IGSF9Q9P2J2 1179 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 PSMD13Q9UNM6 376 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 CITO14578 2027 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 KLF11O14901 512 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 BEST1O76090 585 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 GOT1P17174 413 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 CDKL1Q00532 357 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 PPIL2Q13356 520 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 PDE1CQ14123 709 aaPredicted RBP17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 HACE1Q8IYU2 909 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 BORCS5Q969J3 196 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 ATXN7L3BQ96GX2 97 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 ZFP42Q96MM3 310 aa17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 GBA2Q9HCG7 927 aaPredicted RBP17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 C6orf203Q9P0P8 240 aaPredicted RBP17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 PIN4Q9Y237 131 aaKnown RBP17.64■□□□□ 0.41
LDLRAP1-201ENST00000374338 ZBTB11O95625 1053 aaPredicted RBP17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 CYP2F1P24903 491 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 ABCG1P45844 678 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 PGGT1BP53609 377 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 NME3Q13232 169 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 CYTH1Q15438 398 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 NANOGP8Q6NSW7 305 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 LCLAT1Q6UWP7 414 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 ATG14Q6ZNE5 492 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 DDHD1Q8NEL9 900 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 ACTRT2Q8TDY3 377 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 ZNF512Q96ME7 567 aaPredicted RBP17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 MROH8Q9H579 483 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 ACSS2Q9NR19 701 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 NOX1Q9Y5S8 564 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 APOL1O14791 398 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 P4HA1P13674 534 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 YWHAZP63104 245 aaKnown RBP17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 SOX4Q06945 474 aaPredicted RBP17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 ATP1A4Q13733 1029 aa17.63■□□□□ 0.41
LDLRAP1-201ENST00000374338 ZNF829Q3KNS6 432 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms