RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 LRFN2Q9ULH4 789 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 SOX13Q9UN79 622 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 APOBEC2Q9Y235 224 aaKnown RBP8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 RPS6KL1Q9Y6S9 549 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 A0A1W2PQ45 241 aaPredicted RBP8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 A0A1W2PQY0 241 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 DRGXA6NNA5 263 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 TMEM114B3SHH9 223 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 ENPP3O14638 875 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC22A2O15244 555 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 FKTNO75072 461 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 SPAG7O75391 227 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 PENKP01210 267 aaPredicted RBP8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 CXCL10P02778 98 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 BPGMP07738 259 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 ITGA2BP08514 1039 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 CREB1P16220 341 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 PFKLP17858 780 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 PSMB4P28070 264 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 CRABP2P29373 138 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 ADSLP30566 484 aaPredicted RBP8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 GRK4P32298 578 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 PBX3P40426 434 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 OR1G1P47890 313 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 ARFIP2P53365 341 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 LIMK2P53671 638 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 ZRSR2Q15696 482 aaKnown RBP8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC1A5Q15758 541 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 ANKRD20A4Q4UJ75 823 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 RALGPS1Q5JS13 557 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 TPGS2Q68CL5 300 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 ZNF783Q6ZMS7 281 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 Q6ZNB5 142 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 ASRGL1Q7L266 308 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 PYROXD2Q8N2H3 581 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 LRRC43Q8N309 656 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 RNF169Q8NCN4 708 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 STKLD1Q8NE28 680 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 PPHLN1Q8NEY8 458 aaKnown RBP8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 OR10T2Q8NGX3 314 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 PDCD6IPQ8WUM4 868 aaKnown RBP8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 KLHL29Q96CT2 875 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 FCRL2Q96LA5 508 aaPredicted RBP8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 RBBP8Q99708 897 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 LRMDAQ9H2I8 198 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 GLOD4Q9HC38 313 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 OSER1Q9NX31 292 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 SSX2IPQ9Y2D8 614 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 ARIH1Q9Y4X5 557 aaPredicted RBP8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 TRIP12Q14669 1992 aaPredicted RBP8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 PATJQ8NI35 1801 aa8.89□□□□□ -0.99
SNRNP40-202ENST00000373720 TDRD15B5MCY1 1934 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 THSD7BQ9C0I4 1608 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 WDR27A2RRH5 827 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 HEATR9A2RTY3 570 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 MEIS3P2A8K0S8 358 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 E9PAM4 449 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 PFDN6O15212 129 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 ZBTB24O43167 697 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 HCRTO43612 131 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 TBC1D4O60343 1298 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 MAFKO60675 156 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 SNNO75324 88 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 AVILO75366 819 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 PAGE1O75459 146 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 KLHL2O95198 593 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 C1RP00736 705 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 IGLV3-27P01718 113 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 ZDHHC11BP0C7U3 371 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 CALB2P22676 271 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 PTPN4P29074 926 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 TYK2P29597 1187 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 BRCC3P46736 316 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 ATXN1P54253 815 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 TBX4P57082 545 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 IL10RBQ08334 325 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 SNCBQ16143 134 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 CTXN3Q4LDR2 81 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC39A12Q504Y0 691 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 RAB6CQ53S08 254 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 TAF1BQ53T94 588 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 UBAP2Q5T6F2 1119 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 KIAA0930Q6ICG6 404 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC8B1Q6J4K2 584 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 PKN3Q6P5Z2 889 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 HFE2Q6ZVN8 426 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 RTL10Q7L3V2 364 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 OTOAQ7RTW8 1153 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 METTL3Q86U44 580 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 LRRTM3Q86VH5 581 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 MFN1Q8IWA4 741 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 PARP9Q8IXQ6 854 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 TEX26Q8N6G2 289 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 FITM2Q8N6M3 262 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 ZSCAN18Q8TBC5 510 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 C10orf82Q8WW14 230 aa8.88□□□□□ -0.99
SNRNP40-202ENST00000373720 TSPAN17Q96FV3 270 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms