RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 BNIP3Q12983 259 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 CAMK2BQ13554 666 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 MAN2A1Q16706 1144 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 COL28A1Q2UY09 1125 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 ALFQ53S48 1182 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 SLC45A4Q5BKX6 768 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 AGBL4Q5VU57 503 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 FAM46CQ5VWP2 391 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 NAPEPLDQ6IQ20 393 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 SPATS2Q86XZ4 545 aaKnown RBP16.57■□□□□ 0.24
HDAC8-202ENST00000373556 SH2D3CQ8N5H7 860 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 ZNF397Q8NF99 534 aaPredicted RBP16.57■□□□□ 0.24
HDAC8-202ENST00000373556 PIP4K2CQ8TBX8 421 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 CNDP2Q96KP4 475 aaKnown RBP16.57■□□□□ 0.24
HDAC8-202ENST00000373556 PPP1R9BQ96SB3 815 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 TKTL2Q9H0I9 626 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 MUC3BQ9H195 1237 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 TMPRSS4Q9NRS4 437 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 PPM1HQ9ULR3 514 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 TBC1D30Q9Y2I9 924 aa16.57■□□□□ 0.24
HDAC8-202ENST00000373556 C1QTNF3-AMACRE9PGA6 284 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 MCF2LO15068 1137 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 SLC7A4O43246 635 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 SNAP91O60641 907 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 LDOC1O95751 146 aaPredicted RBP16.56■□□□□ 0.24
HDAC8-202ENST00000373556 MT-CO1P00395 513 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 SRCP12931 536 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 ARRB1P49407 418 aaPredicted RBP16.56■□□□□ 0.24
HDAC8-202ENST00000373556 VASPP50552 380 aaPredicted RBP16.56■□□□□ 0.24
HDAC8-202ENST00000373556 CDH4P55283 916 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 RAPGEF1Q13905 1077 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 C5orf22Q49AR2 442 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 DPY19L2P1Q6NXN4 242 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 PRPF39Q86UA1 669 aaKnown RBP16.56■□□□□ 0.24
HDAC8-202ENST00000373556 FAM71AQ8IYT1 594 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 MLKLQ8NB16 471 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 HNRNPLLQ8WVV9 542 aaKnown RBP16.56■□□□□ 0.24
HDAC8-202ENST00000373556 PSMB7Q99436 277 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 NPY6RQ99463 290 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 PDCL3Q9H2J4 239 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 NDST4Q9H3R1 872 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 WDCPQ9H6R7 721 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 ARHGEF38Q9NXL2 777 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.56■□□□□ 0.24
HDAC8-202ENST00000373556 TPX2Q9ULW0 747 aaKnown RBP16.56■□□□□ 0.24
HDAC8-202ENST00000373556 CA5BQ9Y2D0 317 aa16.56■□□□□ 0.24
HDAC8-202ENST00000373556 BAHCC1Q9P281 2608 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 K7ERQ8 282 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 ALOX15BO15296 676 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 CTSLP07711 333 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 RHOCP08134 193 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 PRKCSHP14314 528 aaPredicted RBP16.55■□□□□ 0.24
HDAC8-202ENST00000373556 CXCR3P49682 368 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 DEUP1Q05D60 604 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 MTA1Q13330 715 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 COL9A2Q14055 689 aaPredicted RBP16.55■□□□□ 0.24
HDAC8-202ENST00000373556 DRAP1Q14919 205 aaPredicted RBP16.55■□□□□ 0.24
HDAC8-202ENST00000373556 C2CD6Q53TS8 623 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 MIIPQ5JXC2 388 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 TAF3Q5VWG9 929 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 TRIM69Q86WT6 500 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 ZDHHC17Q8IUH5 632 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 MFSD2AQ8NA29 543 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 TMEM35BQ8NCS4 154 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 TBCBQ99426 244 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 KDM4CQ9H3R0 1056 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 MPP6Q9NZW5 540 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 VPS51Q9UID3 782 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 FHOD1Q9Y613 1164 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 IGSF10Q6WRI0 2623 aa16.55■□□□□ 0.24
HDAC8-202ENST00000373556 RNF103O00237 685 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 YKT6O15498 198 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 SMAD6O43541 496 aaKnown RBP16.54■□□□□ 0.24
HDAC8-202ENST00000373556 RFPL3O75679 317 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 RRM1P23921 792 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 TAS2R38P59533 333 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 KRT83P78385 493 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 DPCR1Q3MIW9 517 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 VWA3BQ502W6 1294 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 BRMS1LQ5PSV4 323 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 FAM102AQ5T9C2 384 aaPredicted RBP16.54■□□□□ 0.24
HDAC8-202ENST00000373556 LINGO4Q6UY18 593 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 TFAP2DQ7Z6R9 452 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 FAM114A1Q8IWE2 563 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 ZNF683Q8IZ20 524 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 PDCD7Q8N8D1 485 aaKnown RBP16.54■□□□□ 0.24
HDAC8-202ENST00000373556 ATP11CQ8NB49 1132 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 KLK6Q92876 244 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 NT5C3BQ969T7 300 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 MYOCQ99972 504 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 TUBGCP2Q9BSJ2 902 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 C2orf49Q9BVC5 232 aaPredicted RBP16.54■□□□□ 0.24
HDAC8-202ENST00000373556 RRN3Q9NYV6 651 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 DKK4Q9UBT3 224 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 STAP1Q9ULZ2 295 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 HS3ST2Q9Y278 367 aa16.54■□□□□ 0.24
HDAC8-202ENST00000373556 URB1O60287 2271 aaKnown RBP16.54■□□□□ 0.24
HDAC8-202ENST00000373556 ARID1BQ8NFD5 2236 aaPredicted RBP16.54■□□□□ 0.24
HDAC8-202ENST00000373556 DOCK4Q8N1I0 1966 aa16.53■□□□□ 0.24
HDAC8-202ENST00000373556 A0A0D9SEW6 157 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms