RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 DNMT3LQ9UJW3 386 aa25.5■■□□□ 1.67
CTSA-203ENST00000372459 CAPN7Q9Y6W3 813 aa25.5■■□□□ 1.67
CTSA-203ENST00000372459 NYNRINQ9P2P1 1898 aaKnown RBP25.5■■□□□ 1.67
CTSA-203ENST00000372459 DRGXA6NNA5 263 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 ANXA9O76027 345 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 WDR5P61964 334 aaKnown RBP25.49■■□□□ 1.67
CTSA-203ENST00000372459 SLC18A2Q05940 514 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 IFT88Q13099 833 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 NAB1Q13506 487 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 SLC1A5Q15758 541 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 ALFQ53S48 1182 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 MARK2Q7KZI7 788 aaKnown RBP25.49■■□□□ 1.67
CTSA-203ENST00000372459 PIGWQ7Z7B1 504 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 CABS1Q96KC9 395 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 UBP1Q9NZI7 540 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 DOCK4Q8N1I0 1966 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 UGT1A9O60656 530 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 NEBLO76041 1014 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 CNTN5O94779 1100 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 ITGB8P26012 769 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 NIPAL4Q0D2K0 466 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 LVRNQ6Q4G3 990 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 SUGP1Q8IWZ8 645 aaKnown RBP25.49■■□□□ 1.67
CTSA-203ENST00000372459 TCP10LQ8TDR4 215 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 IGSF8Q969P0 613 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 RPRD1AQ96P16 312 aaPredicted RBP25.49■■□□□ 1.67
CTSA-203ENST00000372459 NACA2Q9H009 215 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 UGT1A7Q9HAW7 530 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 UGT1A10Q9HAW8 530 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 UGT1A8Q9HAW9 530 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 CYP4F11Q9HBI6 524 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 RBM22Q9NW64 420 aaKnown RBP eCLIP25.49■■□□□ 1.67
CTSA-203ENST00000372459 SPG21Q9NZD8 308 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 RPS6KL1Q9Y6S9 549 aa25.49■■□□□ 1.67
CTSA-203ENST00000372459 TRIM43BA6NCK2 446 aa25.48■■□□□ 1.67
CTSA-203ENST00000372459 LPXNO60711 386 aa25.48■■□□□ 1.67
CTSA-203ENST00000372459 DNAJB2P25686 324 aa25.48■■□□□ 1.67
CTSA-203ENST00000372459 CNTFP26441 200 aa25.48■■□□□ 1.67
CTSA-203ENST00000372459 CDH17Q12864 832 aa25.48■■□□□ 1.67
CTSA-203ENST00000372459 RNF187Q5TA31 235 aaPredicted RBP25.48■■□□□ 1.67
CTSA-203ENST00000372459 ZNF449Q6P9G9 518 aa25.48■■□□□ 1.67
CTSA-203ENST00000372459 SH2D5Q6ZV89 423 aa25.48■■□□□ 1.67
CTSA-203ENST00000372459 CHSY1Q86X52 802 aa25.48■■□□□ 1.67
CTSA-203ENST00000372459 FATE1Q969F0 183 aa25.48■■□□□ 1.67
CTSA-203ENST00000372459 TRIM43Q96BQ3 446 aaPredicted RBP25.48■■□□□ 1.67
CTSA-203ENST00000372459 APOPT1Q96IL0 206 aa25.48■■□□□ 1.67
CTSA-203ENST00000372459 ACTR5Q9H9F9 607 aaPredicted RBP25.48■■□□□ 1.67
CTSA-203ENST00000372459 FGFR1OP2Q9NVK5 253 aa25.48■■□□□ 1.67
CTSA-203ENST00000372459 MAGEB16A2A368 324 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 PYGBP11216 843 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 ALDH1A3P47895 512 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 CCDC121Q6ZUS5 278 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 ANKS4BQ8N8V4 417 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 CCDC197Q8NCU1 140 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 ELAC2Q9BQ52 826 aaKnown RBP25.47■■□□□ 1.67
CTSA-203ENST00000372459 IL22Q9GZX6 179 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 ZNF840PA6NDX5 716 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 URODP06132 367 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 RAG1P15918 1043 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 TAC1P20366 129 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 FOXN2P32314 431 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 GEMP55040 296 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 ACTN3Q08043 901 aaPredicted RBP25.47■■□□□ 1.67
CTSA-203ENST00000372459 PDK4Q16654 411 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 HECTD3Q5T447 861 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 KLHDC10Q6PID8 442 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 DDX53Q86TM3 631 aaKnown RBP25.47■■□□□ 1.67
CTSA-203ENST00000372459 UNC5BQ8IZJ1 945 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 TMEM199Q8N511 208 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 HMCESQ96FZ2 354 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 ZNF419Q96HQ0 510 aaPredicted RBP25.47■■□□□ 1.67
CTSA-203ENST00000372459 APOL2Q9BQE5 337 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 YIPF1Q9Y548 306 aa25.47■■□□□ 1.67
CTSA-203ENST00000372459 KIAA0355O15063 1070 aa25.46■■□□□ 1.67
CTSA-203ENST00000372459 USP1O94782 785 aa25.46■■□□□ 1.67
CTSA-203ENST00000372459 HLA-DQB2P05538 268 aa25.46■■□□□ 1.67
CTSA-203ENST00000372459 HMGA1P17096 107 aaKnown RBP25.46■■□□□ 1.67
CTSA-203ENST00000372459 TACR2P21452 398 aa25.46■■□□□ 1.67
CTSA-203ENST00000372459 MGAT5Q09328 741 aa25.46■■□□□ 1.67
CTSA-203ENST00000372459 HNRNPDQ14103 355 aaKnown RBP25.46■■□□□ 1.67
CTSA-203ENST00000372459 RGS9BPQ6ZS82 235 aa25.46■■□□□ 1.67
CTSA-203ENST00000372459 TMEM135Q86UB9 458 aa25.46■■□□□ 1.67
CTSA-203ENST00000372459 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.46■■□□□ 1.67
CTSA-203ENST00000372459 SPATA22Q8NHS9 363 aa25.46■■□□□ 1.67
CTSA-203ENST00000372459 MYRFLQ96LU7 910 aa25.46■■□□□ 1.67
CTSA-203ENST00000372459 TRPM5Q9NZQ8 1165 aa25.46■■□□□ 1.67
CTSA-203ENST00000372459 GRID1Q9ULK0 1009 aa25.46■■□□□ 1.67
CTSA-203ENST00000372459 GOLGA6L7A0A1B0GV03 622 aa25.45■■□□□ 1.67
CTSA-203ENST00000372459 RENBPP51606 427 aa25.45■■□□□ 1.67
CTSA-203ENST00000372459 KCNQ1P51787 676 aa25.45■■□□□ 1.67
CTSA-203ENST00000372459 FRG1Q14331 258 aaKnown RBP25.45■■□□□ 1.67
CTSA-203ENST00000372459 TAF12Q16514 161 aa25.45■■□□□ 1.67
CTSA-203ENST00000372459 CERCAMQ5T4B2 595 aa25.45■■□□□ 1.67
CTSA-203ENST00000372459 NADSYN1Q6IA69 706 aa25.45■■□□□ 1.67
CTSA-203ENST00000372459 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.45■■□□□ 1.67
CTSA-203ENST00000372459 ZNF669Q96BR6 464 aaPredicted RBP25.45■■□□□ 1.67
CTSA-203ENST00000372459 CERS2Q96G23 380 aa25.45■■□□□ 1.67
CTSA-203ENST00000372459 TBL1YQ9BQ87 522 aa25.45■■□□□ 1.67
CTSA-203ENST00000372459 FAM237BA0A1B0GVD1 139 aa25.45■■□□□ 1.66
CTSA-203ENST00000372459 F5H5T6 163 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms