RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ADPGKQ9BRR6 497 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 MRPS26Q9BYN8 205 aaKnown RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ELOVL4Q9GZR5 314 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 WDR41Q9HAD4 459 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 OLAHQ9NV23 265 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 DDX56Q9NY93 547 aaKnown RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 RSL24D1Q9UHA3 163 aaKnown RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 VPS51Q9UID3 782 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ZDHHC2Q9UIJ5 367 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ITGA11Q9UKX5 1188 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ARHGAP10A1A4S6 786 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 FAM159BA6NKW6 160 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 E7ENX8 843 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 KCNK1O00180 336 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PSMD12O00232 456 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 NDC80O14777 642 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ST8SIA5O15466 376 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 SIAH2O43255 324 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 MAN1A2O60476 641 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 MICAL2O94851 1124 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ASS1P00966 412 aaKnown RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 SERPINE1P05121 402 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CCDC166P0CW27 439 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CXCL8P10145 99 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PIM1P11309 404 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 HNRNPLP14866 589 aaKnown RBP eCLIP5.52□□□□□ -1.538e-11■■■□□ 18.4
ATG4A-204ENST00000372246 PSMC3P17980 439 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 GABRB2P47870 512 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CLCN2P51788 898 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 NAGLUP54802 743 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PITX1P78337 314 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PFKPQ01813 784 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 FPGSQ05932 587 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PIGFQ07326 219 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PLCL1Q15111 1095 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 NEDD8Q15843 81 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 HADHQ16836 314 aaKnown RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 RARS2Q5T160 578 aaKnown RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 MAP3K21Q5TCX8 1036 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 BNC2Q6ZN30 1099 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 FAM183BPQ6ZVS7 135 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ENOSF1Q7L5Y1 443 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 KDELC2Q7Z4H8 507 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ADGRG6Q86SQ4 1221 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 TICAM1Q8IUC6 712 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 SLC15A3Q8IY34 581 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 DCLK2Q8N568 766 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CMASQ8NFW8 434 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 TANKQ92844 425 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 SLCO4A1Q96BD0 722 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PPWD1Q96BP3 646 aaKnown RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CMTM5Q96DZ9 223 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 MFSD3Q96ES6 412 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 VCPIP1Q96JH7 1222 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 RNF157Q96PX1 679 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 SNRNP25Q9BV90 132 aaKnown RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 GATA5Q9BWX5 397 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 BRD8Q9H0E9 1235 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ST6GALNAC4Q9H4F1 302 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PIF1Q9H611 641 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ZFYVE28Q9HCC9 887 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 TCF7L2Q9NQB0 619 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 SNX15Q9NRS6 342 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 DNAJB4Q9UDY4 337 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 EGFL7Q9UHF1 273 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 AP4E1Q9UPM8 1137 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 SH3GLB1Q9Y371 365 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PCDHA10Q9Y5I2 948 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 COL5A3P25940 1745 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 UNCXA6NJT0 531 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 YDJCA8MPS7 323 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 G3V2L1 256 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 J3QL48 77 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 KLHL2O95198 593 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ZBTB11O95625 1053 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 NFICP08651 508 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 KRT7P08729 469 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ALOX15P16050 662 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ZNF182P17025 639 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ZNF24P17028 368 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CHRM3P20309 590 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PLK1P53350 603 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ACTR2P61160 394 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 TNK2Q07912 1038 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 SFSWAPQ12872 951 aaKnown RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PMS2P3Q13401 168 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 TRPC3Q13507 836 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CAPSQ13938 189 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 SKIV2LQ15477 1246 aaKnown RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CCDC14Q49A88 953 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 HSP90AA5PQ58FG0 334 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 PIGGQ5H8A4 983 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 ARL13AQ5H913 290 aaPredicted RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 LRRC38Q5VT99 294 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 EEF1DP3Q658K8 133 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 TMEM214Q6NUQ4 689 aaKnown RBP5.52□□□□□ -1.53
ATG4A-204ENST00000372246 C16orf87Q6PH81 154 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 EPGNQ6UW88 154 aa5.52□□□□□ -1.53
ATG4A-204ENST00000372246 CTU1Q7Z7A3 348 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms