RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 ALKBH5Q6P6C2 394 aaKnown RBP20.51■□□□□ 0.87
TMEM53-205ENST00000372244 USP30Q70CQ3 517 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 CACUL1Q86Y37 369 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 STK40Q8N2I9 435 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 OR7D4Q8NG98 312 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 TBC1D31Q96DN5 1066 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 GPR174Q9BXC1 333 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 ACE2Q9BYF1 805 aaPredicted RBP20.51■□□□□ 0.87
TMEM53-205ENST00000372244 PABPC3Q9H361 631 aaKnown RBP20.51■□□□□ 0.87
TMEM53-205ENST00000372244 EVLQ9UI08 416 aaPredicted RBP20.51■□□□□ 0.87
TMEM53-205ENST00000372244 NUMA1Q14980 2115 aa20.51■□□□□ 0.87
TMEM53-205ENST00000372244 CXorf51AA0A1B0GTR3 108 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 METTL12A8MUP2 240 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 SRCP12931 536 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 ACSL1P33121 698 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 IRX4P78413 519 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 SLC20A2Q08357 652 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 CST6Q15828 149 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 ASTE1Q2TB18 679 aaPredicted RBP20.5■□□□□ 0.87
TMEM53-205ENST00000372244 TCEAL6Q6IPX3 200 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 SARM1Q6SZW1 724 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 MMAAQ8IVH4 418 aaKnown RBP20.5■□□□□ 0.87
TMEM53-205ENST00000372244 C12orf50Q8NA57 414 aaPredicted RBP20.5■□□□□ 0.87
TMEM53-205ENST00000372244 DNASE2BQ8WZ79 361 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 TCEAL3Q969E4 200 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 HSPA12BQ96MM6 686 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 PCED1AQ9H1Q7 454 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 PI4KAP42356 2102 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.5■□□□□ 0.87
TMEM53-205ENST00000372244 PATE3B3GLJ2 98 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 K7ERQ8 282 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 KHNYNO15037 678 aaKnown RBP20.5■□□□□ 0.87
TMEM53-205ENST00000372244 MCF2LO15068 1137 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 CYP1A2P05177 515 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 GLDCP23378 1020 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 LIMK1P53667 647 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 ACAP1Q15027 740 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 ACCSLQ4AC99 568 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 FAM124AQ86V42 546 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 NETO1Q8TDF5 533 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 SPON2Q9BUD6 331 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 THAP2Q9H0W7 228 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 MAGEH1Q9H213 219 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 MYO1AQ9UBC5 1043 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 PPM1HQ9ULR3 514 aa20.5■□□□□ 0.87
TMEM53-205ENST00000372244 WASH4PA8MWX3 477 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 MID1O15344 667 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 SMAD6O43541 496 aaKnown RBP20.49■□□□□ 0.87
TMEM53-205ENST00000372244 RNF8O76064 485 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 SLC8A1P32418 973 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 EIF4A3P38919 411 aaKnown RBP20.49■□□□□ 0.87
TMEM53-205ENST00000372244 CLCN6P51797 869 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 MAPK8IP2Q13387 824 aaPredicted RBP20.49■□□□□ 0.87
TMEM53-205ENST00000372244 PUM1Q14671 1186 aaKnown RBP eCLIP20.49■□□□□ 0.87
TMEM53-205ENST00000372244 TTC31Q49AM3 519 aaPredicted RBP20.49■□□□□ 0.87
TMEM53-205ENST00000372244 SYCP2LQ5T4T6 812 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 ERMARDQ5T6L9 678 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 SLC23A3Q6PIS1 610 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 CYP4V2Q6ZWL3 525 aaPredicted RBP20.49■□□□□ 0.87
TMEM53-205ENST00000372244 ATP11CQ8NB49 1132 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 CEP76Q8TAP6 659 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 BTBD1Q9H0C5 482 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 SGK2Q9HBY8 427 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 FBXL12Q9NXK8 326 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 DNAI1Q9UI46 699 aa20.49■□□□□ 0.87
TMEM53-205ENST00000372244 CACNA1AO00555 2505 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 LNP1A1A4G5 178 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 EIF3CLB5ME19 914 aaKnown RBP20.48■□□□□ 0.87
TMEM53-205ENST00000372244 CBX4O00257 560 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 ZNF821O75541 412 aaPredicted RBP20.48■□□□□ 0.87
TMEM53-205ENST00000372244 CD160O95971 181 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 C5AR1P21730 350 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 EPHB2P29323 1055 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 MIPP30301 263 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 HTR7P34969 479 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 PCK1P35558 622 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 ETFBP38117 255 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 SFSWAPQ12872 951 aaKnown RBP20.48■□□□□ 0.87
TMEM53-205ENST00000372244 TBX2Q13207 712 aaPredicted RBP20.48■□□□□ 0.87
TMEM53-205ENST00000372244 AASDHQ4L235 1098 aaPredicted RBP20.48■□□□□ 0.87
TMEM53-205ENST00000372244 WDR45BQ5MNZ6 344 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 CCDC122Q5T0U0 273 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 RETSATQ6NUM9 610 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 LINGO4Q6UY18 593 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 PSTKQ8IV42 348 aaKnown RBP20.48■□□□□ 0.87
TMEM53-205ENST00000372244 RTL3Q8N8U3 475 aaKnown RBP20.48■□□□□ 0.87
TMEM53-205ENST00000372244 ARHGEF2Q92974 986 aaKnown RBP20.48■□□□□ 0.87
TMEM53-205ENST00000372244 PEBP4Q96S96 227 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 EIF3CQ99613 913 aaKnown RBP20.48■□□□□ 0.87
TMEM53-205ENST00000372244 EPAS1Q99814 870 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 NCAPGQ9BPX3 1015 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 NEUROG2Q9H2A3 272 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 NOL6Q9H6R4 1146 aaKnown RBP20.48■□□□□ 0.87
TMEM53-205ENST00000372244 ATP13A1Q9HD20 1204 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 SERGEFQ9UGK8 458 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 PCSK1NQ9UHG2 260 aa20.48■□□□□ 0.87
TMEM53-205ENST00000372244 CNOT1A5YKK6 2376 aaKnown RBP20.47■□□□□ 0.87
TMEM53-205ENST00000372244 SSU72P8A0A1W2PR75 194 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 C10orf142B7Z368 130 aa20.47■□□□□ 0.87
TMEM53-205ENST00000372244 SLC30A4O14863 429 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms