RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 WFIKKN2Q8TEU8 576 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 C2orf49Q9BVC5 232 aaPredicted RBP16.2■□□□□ 0.18
TMEM53-204ENST00000372243 ATP13A1Q9HD20 1204 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 SLC2A4RGQ9NR83 387 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 DNAJC17Q9NVM6 304 aaKnown RBP16.2■□□□□ 0.18
TMEM53-204ENST00000372243 DEC1Q9P2X7 70 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 VPS28Q9UK41 221 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 HPCAL4Q9UM19 191 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 ZNF148Q9UQR1 794 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 TICRRQ7Z2Z1 1910 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 UNC80Q8N2C7 3258 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 ZSCAN5CA6NGD5 496 aaPredicted RBP16.19■□□□□ 0.18
TMEM53-204ENST00000372243 MATN3O15232 486 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 PRAMEF11O60813 436 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 ASGR2P07307 311 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 SRFP11831 508 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 OPRD1P41143 372 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 AP1B1Q10567 949 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 PITRM1Q5JRX3 1037 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 ARHGAP36Q6ZRI8 547 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 C12orf40Q86WS4 652 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 KLHL7Q8IXQ5 586 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 CCDC105Q8IYK2 499 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 AHI1Q8N157 1196 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 CCDC33Q8N5R6 958 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 HTR3CQ8WXA8 447 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 RTP4Q96DX8 246 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 ZNF599Q96NL3 588 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 USP29Q9HBJ7 922 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 INTS6Q9UL03 887 aaKnown RBP16.19■□□□□ 0.18
TMEM53-204ENST00000372243 COL6A3P12111 3177 aa16.19■□□□□ 0.18
TMEM53-204ENST00000372243 ZMPSTE24O75844 475 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 SLU7O95391 586 aaKnown RBP16.18■□□□□ 0.18
TMEM53-204ENST00000372243 GLULP15104 373 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 RBL1P28749 1068 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 KCNJ1P48048 391 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 TUBB4BP68371 445 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 SULT2A1Q06520 285 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 DHX34Q14147 1143 aaKnown RBP16.18■□□□□ 0.18
TMEM53-204ENST00000372243 GRAMD4Q6IC98 578 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 ZNF354CQ86Y25 554 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 SUGP1Q8IWZ8 645 aaKnown RBP16.18■□□□□ 0.18
TMEM53-204ENST00000372243 APCDD1Q8J025 514 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 PHTF2Q8N3S3 785 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 ALLCQ8N6M5 410 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 CCDC26Q8TAB7 109 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 MAML1Q92585 1016 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 CHFRQ96EP1 664 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 MSANTD3Q96H12 275 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 KRT12Q99456 494 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 VAT1Q99536 393 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 TMEM121Q9BTD3 319 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 SPON2Q9BUD6 331 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 C8orf33Q9H7E9 229 aaPredicted RBP16.18■□□□□ 0.18
TMEM53-204ENST00000372243 SP110Q9HB58 689 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 PDFQ9HBH1 243 aa16.18■□□□□ 0.18
TMEM53-204ENST00000372243 J3KR12 359 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 PEX11BO96011 259 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 VAV1P15498 845 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 SLC6A11P48066 632 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 GEMIN4P57678 1058 aaKnown RBP16.17■□□□□ 0.18
TMEM53-204ENST00000372243 IFI35P80217 286 aaPredicted RBP16.17■□□□□ 0.18
TMEM53-204ENST00000372243 SLC20A2Q08357 652 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 HNRNPDQ14103 355 aaKnown RBP16.17■□□□□ 0.18
TMEM53-204ENST00000372243 FUT11Q495W5 492 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 TMCO4Q5TGY1 634 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 RETSATQ6NUM9 610 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 MAATS1Q7Z4T9 603 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 ADIPOR2Q86V24 386 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 RALGPS2Q86X27 583 aaPredicted RBP16.17■□□□□ 0.18
TMEM53-204ENST00000372243 TTC8Q8TAM2 541 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 EXOC4Q96A65 974 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 TTC17Q96AE7 1141 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 CCDC114Q96M63 670 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 ASB2Q96Q27 587 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 PNKPQ96T60 521 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 AMACRQ9UHK6 382 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 DUSP12Q9UNI6 340 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 A0A0A0MRY4 1105 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 SGK1O00141 431 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 CBX4O00257 560 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 KCNN4O15554 427 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 ECEL1O95672 775 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 GAS8O95995 478 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 BMP1P13497 986 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 PTGIRP43119 386 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 ARF5P84085 180 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 DR1Q01658 176 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 RFTN1Q14699 578 aaPredicted RBP16.17■□□□□ 0.18
TMEM53-204ENST00000372243 EIF4HQ15056 248 aaKnown RBP16.17■□□□□ 0.18
TMEM53-204ENST00000372243 GEN1Q17RS7 908 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 GLE1Q53GS7 698 aaKnown RBP16.17■□□□□ 0.18
TMEM53-204ENST00000372243 INO80DQ53TQ3 878 aaPredicted RBP16.17■□□□□ 0.18
TMEM53-204ENST00000372243 SYDE1Q6ZW31 735 aaPredicted RBP16.17■□□□□ 0.18
TMEM53-204ENST00000372243 METTL3Q86U44 580 aaKnown RBP16.17■□□□□ 0.18
TMEM53-204ENST00000372243 TERB1Q8NA31 727 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 NSMCE1Q8WV22 266 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 CASKIN2Q8WXE0 1202 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 IL12RB2Q99665 862 aa16.17■□□□□ 0.18
TMEM53-204ENST00000372243 C10orf88Q9H8K7 445 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms