RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 THUMPD3Q9BV44 507 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 TKTL2Q9H0I9 626 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 OSGEPL1Q9H4B0 414 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 NOL6Q9H6R4 1146 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 TUBGCP4Q9UGJ1 667 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 MLXQ9UH92 298 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 LRRC74BQ6ZQY2 392 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 ZBTB49Q6ZSB9 765 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 CENPLQ8N0S6 344 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 TDRD5Q8NAT2 981 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 GDPD5Q8WTR4 605 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 SGF29Q96ES7 293 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 APOL2Q9BQE5 337 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 TMEM121Q9BTD3 319 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 LNPEPQ9UIQ6 1025 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 ROBO3Q96MS0 1386 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 E5RJQ4 531 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 CYP2A6P11509 494 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 NPR2P20594 1047 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 GRM5P41594 1212 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 PSMD5Q16401 504 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 CBWD6Q4V339 395 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 CBWD3Q5JTY5 395 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 CBWD5Q5RIA9 395 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 RBM20Q5T481 1227 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 ILDR2Q71H61 639 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 YTHDF3Q7Z739 585 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 STK32AQ8WU08 396 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 FAM105AQ9NUU6 356 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 NMRK1Q9NWW6 199 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 PRDM4Q9UKN5 801 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 RIPK3Q9Y572 518 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 SPACA6W5XKT8 324 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 GJB1P08034 283 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 CSH1P0DML2 217 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 CSH2P0DML3 217 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 MSH3P20585 1137 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 CACHD1Q5VU97 1274 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 DIS3LQ8TF46 1054 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 ZNF333Q96JL9 665 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 DUSP9Q99956 384 aaKnown RBP13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 TMEM79Q9BSE2 394 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 ROGDIQ9GZN7 287 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 C2CD2Q9Y426 696 aa13.53□□□□□ -0.24
RAPGEF1-201ENST00000372189 TSPAN4O14817 238 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 ASGR1P07306 291 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 NPR3P17342 541 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 ADARP55265 1226 aaKnown RBP13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 ELF3P78545 371 aaPredicted RBP13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 FOXR1Q6PIV2 292 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 LRRC8DQ7L1W4 858 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 SUSD6Q92537 303 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 SAR1AQ9NR31 198 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 VTI1BQ9UEU0 232 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 PEX1O43933 1283 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 TRIM13O60858 407 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 SUPT7LO94864 414 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 CXCL14O95715 111 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 CPA3P15088 417 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 PECAM1P16284 738 aaPredicted RBP13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 NDUFV1P49821 464 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 KAT2BQ92831 832 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 MTMR8Q96EF0 704 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 PGM2Q96G03 612 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 FAM50BQ9Y247 325 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 LMO7Q8WWI1 1683 aa13.52□□□□□ -0.24
RAPGEF1-201ENST00000372189 TBC1D3BA6NDS4 549 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 TNFAIP8O95379 198 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 FAM153BP0C7A2 387 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 NCKAP1LP55160 1127 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 DLG4P78352 724 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 PHKG1Q16816 387 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 FAM153CQ494X1 144 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 DEFB107AQ8IZN7 70 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 FUKQ8N0W3 1084 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 UBP1Q9NZI7 540 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 IFRD1O00458 451 aaPredicted RBP13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 SEPT4O43236 478 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 CA12O43570 354 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 PARNO95453 639 aaKnown RBP13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 FGBP02675 491 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 TNFSF9P41273 254 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 PTPN5P54829 565 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 RTP1P59025 263 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 MMRN1Q13201 1228 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 ACOX1Q15067 660 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 KYQ8NBH2 561 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 PNPT1Q8TCS8 783 aaKnown RBP13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 OXNAD1Q96HP4 312 aaPredicted RBP13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 INPP4AQ96PE3 977 aaPredicted RBP13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 DAPK2Q9UIK4 370 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 POFUT2Q9Y2G5 429 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 DYRK1BQ9Y463 629 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 NPIPA7E9PJI5 369 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 NFKBIEO00221 500 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 TOMM70O94826 608 aa13.52□□□□□ -0.25
RAPGEF1-201ENST00000372189 NPIPA8P0DM63 369 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms