RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 IFI16Q16666 785 aaKnown RBP15.18■□□□□ 0.02
COL9A1-204ENST00000370496 HNRNPA1L2Q32P51 320 aaKnown RBP15.18■□□□□ 0.02
COL9A1-204ENST00000370496 PARP15Q460N3 678 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 ACCSLQ4AC99 568 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 RETSATQ6NUM9 610 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 TMCO3Q6UWJ1 677 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 LINGO4Q6UY18 593 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 WDR5BQ86VZ2 330 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 RASSF3Q86WH2 238 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 MAP7D3Q8IWC1 876 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 RHOT1Q8IXI2 618 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 ATP11CQ8NB49 1132 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 KCTD6Q8NC69 237 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 ARHGEF2Q92974 986 aaKnown RBP15.18■□□□□ 0.02
COL9A1-204ENST00000370496 HMCESQ96FZ2 354 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 MYO19Q96H55 970 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 CSPG4P5Q96PW8 444 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 LACRTQ9GZZ8 138 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 GOLPH3Q9H4A6 298 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 FBRSQ9HAH7 460 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 RCOR3Q9P2K3 495 aaPredicted RBP15.18■□□□□ 0.02
COL9A1-204ENST00000370496 EBF1Q9UH73 591 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 SUN2Q9UH99 717 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 CCDC163A0A0D9SF12 145 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 LRRD1A4D1F6 860 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 TTC34A8MYJ7 566 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 RASA4BC9J798 803 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 PJA2O43164 708 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 RASA4O43374 803 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 PSTPIP1O43586 416 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 CD48P09326 243 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 SERPINB6P35237 376 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 GEMIN4P57678 1058 aaKnown RBP15.17■□□□□ 0.02
COL9A1-204ENST00000370496 YBEYP58557 167 aaPredicted RBP15.17■□□□□ 0.02
COL9A1-204ENST00000370496 DPYSL3Q14195 570 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 PDK2Q15119 407 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 UMODL1-AS1Q8N2C9 162 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 SH2D3CQ8N5H7 860 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 TPCN2Q8NHX9 752 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 NELL1Q92832 810 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 CELF6Q96J87 481 aaKnown RBP15.17■□□□□ 0.02
COL9A1-204ENST00000370496 SPACA7Q96KW9 195 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 ZNF670Q9BS34 389 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 TSGA10Q9BZW7 698 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 SLC6A17Q9H1V8 727 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 SLCO3A1Q9UIG8 710 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 SALL4Q9UJQ4 1053 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 HS3ST2Q9Y278 367 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 DUSP10Q9Y6W6 482 aa15.17■□□□□ 0.02
COL9A1-204ENST00000370496 ARHGAP42A6NI28 874 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 DFFAO00273 331 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 SIN3BO75182 1162 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 CCDC175P0C221 793 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 SRCP12931 536 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 SERPINH1P50454 418 aaKnown RBP15.16■□□□□ 0.02
COL9A1-204ENST00000370496 CLCN6P51797 869 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 NDST2P52849 883 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 ARF5P84085 180 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 CCZ1BP86790 482 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 CCZ1P86791 482 aaPredicted RBP15.16■□□□□ 0.02
COL9A1-204ENST00000370496 MMRN1Q13201 1228 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 CAMK2GQ13555 558 aaPredicted RBP15.16■□□□□ 0.02
COL9A1-204ENST00000370496 ATP13A4Q4VNC1 1196 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 LRRC38Q5VT99 294 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 Q6ZVU0 165 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 NPWQ8N729 165 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 ZBTB44Q8NCP5 570 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 OR2T3Q8NH03 318 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 TSC1Q92574 1164 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 MRGPRX1Q96LB2 322 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 CCDC114Q96M63 670 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 ACE2Q9BYF1 805 aaPredicted RBP15.16■□□□□ 0.02
COL9A1-204ENST00000370496 MTG2Q9H4K7 406 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 NOL6Q9H6R4 1146 aaKnown RBP15.16■□□□□ 0.02
COL9A1-204ENST00000370496 PRDM16Q9HAZ2 1276 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 CD248Q9HCU0 757 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 PRSS16Q9NQE7 514 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 DDX56Q9NY93 547 aaKnown RBP15.16■□□□□ 0.02
COL9A1-204ENST00000370496 TRIM10Q9UDY6 481 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 ARIH1Q9Y4X5 557 aaPredicted RBP15.16■□□□□ 0.02
COL9A1-204ENST00000370496 ADGRG1Q9Y653 693 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 ALG6Q9Y672 507 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 CACNA1HO95180 2353 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 PLXND1Q9Y4D7 1925 aa15.16■□□□□ 0.02
COL9A1-204ENST00000370496 ZSCAN5CA6NGD5 496 aaPredicted RBP15.15■□□□□ 0.02
COL9A1-204ENST00000370496 DCLK1O15075 740 aa15.15■□□□□ 0.02
COL9A1-204ENST00000370496 ATP9BO43861 1147 aa15.15■□□□□ 0.02
COL9A1-204ENST00000370496 BNIP3LO60238 219 aa15.15■□□□□ 0.02
COL9A1-204ENST00000370496 RNASEH1O60930 286 aaKnown RBP15.15■□□□□ 0.02
COL9A1-204ENST00000370496 RPP40O75818 363 aaKnown RBP15.15■□□□□ 0.02
COL9A1-204ENST00000370496 AMPD1P23109 780 aa15.15■□□□□ 0.02
COL9A1-204ENST00000370496 VASPP50552 380 aaPredicted RBP15.15■□□□□ 0.02
COL9A1-204ENST00000370496 COPAP53621 1224 aa15.15■□□□□ 0.02
COL9A1-204ENST00000370496 NHLH1Q02575 133 aa15.15■□□□□ 0.02
COL9A1-204ENST00000370496 ELAVL3Q14576 367 aaKnown RBP15.15■□□□□ 0.02
COL9A1-204ENST00000370496 DLG2Q15700 870 aa15.15■□□□□ 0.02
COL9A1-204ENST00000370496 USP39Q53GS9 565 aaKnown RBP15.15■□□□□ 0.02
COL9A1-204ENST00000370496 ZNF776Q68DI1 518 aaPredicted RBP15.15■□□□□ 0.02
COL9A1-204ENST00000370496 C22orf39Q6P5X5 142 aa15.15■□□□□ 0.02
COL9A1-204ENST00000370496 TMPRSS6Q8IU80 811 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms