RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 IGLV3-10A0A075B6K4 115 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 TBC1D3DA0A087WVF3 549 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 TBC1D3IA0A087WXS9 549 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 TBC1D3EA0A087X179 549 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 TBC1D3KA0A087X1G2 549 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 TBC1D3FA6NER0 549 aaPredicted RBP16.56■□□□□ 0.24
VMA21-202ENST00000370361 TBC1D3LB9A6J9 549 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 E9PAM4 449 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 F8VZ95 297 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 H0Y8X5 98 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 RHOCP08134 193 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 C1SP09871 688 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 TBC1D3HP0C7X1 549 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 ZNF18P17022 549 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 ETFBP38117 255 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 SLC20A2Q08357 652 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 KCNMA1Q12791 1236 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 SETMARQ53H47 684 aaPredicted RBP16.56■□□□□ 0.24
VMA21-202ENST00000370361 TBC1D3GQ6DHY5 549 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 TBC1D3CQ6IPX1 549 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 TRIM72Q6ZMU5 477 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 ZSCAN30Q86W11 494 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 XYLT1Q86Y38 959 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 TBC1D3Q8IZP1 549 aaPredicted RBP16.56■□□□□ 0.24
VMA21-202ENST00000370361 GPT2Q8TD30 523 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 DKK4Q9UBT3 224 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 FAM208BQ5VWN6 2430 aa16.56■□□□□ 0.24
VMA21-202ENST00000370361 PLXNA2O75051 1894 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 TMEM131Q92545 1883 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 A0A1W2PR77 199 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 ILVBLA1L0T0 632 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 SRRM3A6NNA2 597 aaPredicted RBP16.55■□□□□ 0.24
VMA21-202ENST00000370361 ADCY5O95622 1261 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 PRNPP04156 253 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 RXRGP48443 463 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 RNASE9P60153 205 aaKnown RBP16.55■□□□□ 0.24
VMA21-202ENST00000370361 FKBP15Q5T1M5 1219 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 OTUD1Q5VV17 481 aaPredicted RBP16.55■□□□□ 0.24
VMA21-202ENST00000370361 RETSATQ6NUM9 610 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.55■□□□□ 0.24
VMA21-202ENST00000370361 BNIPLQ7Z465 357 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 SLCO6A1Q86UG4 719 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 ZNF683Q8IZ20 524 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 TMIEQ8NEW7 156 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 ANKRD20A12PQ8NF67 263 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 FAM174AQ8TBP5 190 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 PIP4K2CQ8TBX8 421 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 EPS8L1Q8TE68 723 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 PPP1R16AQ96I34 528 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 CEP44Q9C0F1 390 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 DYRK4Q9NR20 520 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 TOR4AQ9NXH8 423 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 PPARGC1AQ9UBK2 798 aaKnown RBP16.55■□□□□ 0.24
VMA21-202ENST00000370361 ASPMQ8IZT6 3477 aa16.55■□□□□ 0.24
VMA21-202ENST00000370361 CFAP47Q6ZTR5 3102 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 PRAMEF26H0Y7S4 382 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 TLR4O00206 839 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 ITGAVP06756 1048 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 PNMA6AP0CW24 399 aaPredicted RBP16.54■□□□□ 0.24
VMA21-202ENST00000370361 SRCP12931 536 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 OR1E1P30953 314 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 RECQLP46063 649 aaPredicted RBP16.54■□□□□ 0.24
VMA21-202ENST00000370361 NOMO3P69849 1222 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 NRG1Q02297 640 aaPredicted RBP16.54■□□□□ 0.24
VMA21-202ENST00000370361 ARL13BQ3SXY8 428 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 AGBL4Q5VU57 503 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 Q6ZVU0 165 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 PROSER1Q86XN7 944 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 ATP11CQ8NB49 1132 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 TBCBQ99426 244 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 CCDC86Q9H6F5 360 aaKnown RBP16.54■□□□□ 0.24
VMA21-202ENST00000370361 TMEM59LQ9UK28 342 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 BTBD3Q9Y2F9 522 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 CHD6Q8TD26 2715 aa16.54■□□□□ 0.24
VMA21-202ENST00000370361 TP53BP1Q12888 1972 aaPredicted RBP16.54■□□□□ 0.24
VMA21-202ENST00000370361 GOLGA6L22H0YM25 854 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 ENDOD1O94919 500 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 ATXN1LP0C7T5 689 aaKnown RBP16.53■□□□□ 0.24
VMA21-202ENST00000370361 VAV1P15498 845 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 GEMIN4P57678 1058 aaKnown RBP16.53■□□□□ 0.24
VMA21-202ENST00000370361 NXPH1P58417 271 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 SCAPQ12770 1279 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 STAT4Q14765 748 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 SMAD1Q15797 465 aaKnown RBP16.53■□□□□ 0.24
VMA21-202ENST00000370361 KCNT1Q5JUK3 1230 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 LAYNQ6UX15 382 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 RBM43Q6ZSC3 357 aaKnown RBP16.53■□□□□ 0.24
VMA21-202ENST00000370361 C14orf80Q86SX3 495 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 NOP9Q86U38 636 aaKnown RBP16.53■□□□□ 0.24
VMA21-202ENST00000370361 PNPLA1Q8N8W4 532 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 ZYG11BQ9C0D3 744 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 EBF2Q9HAK2 575 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 SAMSN1Q9NSI8 373 aaKnown RBP16.53■□□□□ 0.24
VMA21-202ENST00000370361 VPS51Q9UID3 782 aa16.53■□□□□ 0.24
VMA21-202ENST00000370361 PTPRBP23467 1997 aa16.52■□□□□ 0.24
VMA21-202ENST00000370361 WNT1P04628 370 aa16.52■□□□□ 0.24
VMA21-202ENST00000370361 CAPNS1P04632 268 aa16.52■□□□□ 0.24
VMA21-202ENST00000370361 EPHA8P29322 1005 aaPredicted RBP16.52■□□□□ 0.24
VMA21-202ENST00000370361 CHRNA3P32297 505 aa16.52■□□□□ 0.24
VMA21-202ENST00000370361 FLT3P36888 993 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms