RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 EDN1P05305 212 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 COL6A2P12110 1019 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 TCF7P36402 384 aaPredicted RBP10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 GRIA1P42261 906 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 CCR3P51677 355 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 LIMK2P53671 638 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 PRKAA1Q13131 559 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 BCL2A1Q16548 175 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 MOGQ16653 247 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 ANKDD1AQ495B1 522 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 MTERF2Q49AM1 385 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 NHSL2Q5HYW2 709 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 SPANXN3Q5MJ09 141 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 TRNP1Q6NT89 227 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 APOBEC3FQ8IUX4 373 aaKnown RBP10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 ARNTL2Q8WYA1 636 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 TFAP2CQ92754 450 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 THAP11Q96EK4 314 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 RBBP8Q99708 897 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 YIPF2Q9BWQ6 316 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 GATA5Q9BWX5 397 aaPredicted RBP10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 PAIP1Q9H074 479 aaKnown RBP10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 RPF2Q9H7B2 306 aaKnown RBP10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 OXSMQ9NWU1 459 aa10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 DUS2Q9NX74 493 aaKnown RBP10.71□□□□□ -0.69
LYSMD1-201ENST00000368908 TCAF2A6NFQ2 919 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 HACD1B0YJ81 288 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 WNT10BO00744 389 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 GRID2O43424 1007 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 CD1EP15812 388 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 PDGFRAP16234 1089 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 MYF6P23409 242 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 MPSTP25325 297 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 SPRP35270 261 aaPredicted RBP10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 CTBSQ01459 385 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 PTPN11Q06124 597 aaPredicted RBP10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 TMEM132AQ24JP5 1023 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 FKBP1CQ5VVH2 108 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 ABHD15Q6UXT9 468 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 LYSMD3Q7Z3D4 306 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 CCDC60Q8IWA6 550 aaPredicted RBP10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 CENPSQ8N2Z9 138 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 DCLK2Q8N568 766 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 LRTOMTQ8WZ04 291 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 TDRD1Q9BXT4 1180 aaKnown RBP10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 UNC93B1Q9H1C4 597 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 TRPV6Q9H1D0 765 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 WDR55Q9H6Y2 383 aaPredicted RBP10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 SELENONQ9NZV5 590 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 H3BMQ9 156 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 TRIM24O15164 1050 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 OGTO15294 1046 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 PAPSS1O43252 624 aaPredicted RBP10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 BMP2P12643 396 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 ZNF24P17028 368 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 GABRB3P28472 473 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 MSX2P35548 267 aaPredicted RBP10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 GPD2P43304 727 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 PSME3P61289 254 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 SH3PXD2AQ5TCZ1 1133 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 ARHGEF16Q5VV41 709 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 CASC4Q6P4E1 433 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 ZYG11AQ6WRX3 759 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 TMEM110Q86TL2 294 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 SLC15A3Q8IY34 581 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 MYO1HQ8N1T3 1032 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 GRIN3AQ8TCU5 1115 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 PBXIP1Q96AQ6 731 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 CERS2Q96G23 380 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 COG8Q96MW5 612 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 NEURL2Q9BR09 285 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 SNRNP25Q9BV90 132 aaKnown RBP10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 SLC38A10Q9HBR0 1119 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 ZNF358Q9NW07 568 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 PCDHGA7Q9Y5G6 932 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 PPP2R3BQ9Y5P8 575 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 MGAMO43451 1857 aa10.7□□□□□ -0.7
LYSMD1-201ENST00000368908 TRPM7Q96QT4 1865 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 A0A0A0MRY4 1105 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 DYTNA2CJ06 578 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 AKAP10O43572 662 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 DGKIO75912 1065 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 TNNC2P02585 160 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 FUCA1P04066 466 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 C7P10643 843 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 CYP2F1P24903 491 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 TNFSF9P41273 254 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 GJA8P48165 433 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 CDH15P55291 814 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 RPS3AP61247 264 aaKnown RBP10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 MAPRE2Q15555 327 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 C15orf59Q2T9L4 293 aaPredicted RBP10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 MTX3Q5HYI7 312 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 INTS11Q5TA45 600 aaKnown RBP10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 LIPMQ5VYY2 423 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 HMBOX1Q6NT76 420 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 TMEM53Q6P2H8 277 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 FASTKD5Q7L8L6 764 aaKnown RBP10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 VSIG10LQ86VR7 867 aa10.69□□□□□ -0.7
LYSMD1-201ENST00000368908 HERC6Q8IVU3 1022 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms