RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 DCAF4L2Q8NA75 395 aa14.22□□□□□ -0.13
TPM3-211ENST00000368531 TXNDC5Q8NBS9 432 aaKnown RBP14.22□□□□□ -0.13
TPM3-211ENST00000368531 LRRN4Q8WUT4 740 aa14.22□□□□□ -0.13
TPM3-211ENST00000368531 TTC17Q96AE7 1141 aa14.22□□□□□ -0.13
TPM3-211ENST00000368531 CLDN23Q96B33 292 aa14.22□□□□□ -0.13
TPM3-211ENST00000368531 C2orf49Q9BVC5 232 aaPredicted RBP14.22□□□□□ -0.13
TPM3-211ENST00000368531 LRRC19Q9H756 370 aa14.22□□□□□ -0.13
TPM3-211ENST00000368531 C11orf16Q9NQ32 467 aa14.22□□□□□ -0.13
TPM3-211ENST00000368531 VPS51Q9UID3 782 aa14.22□□□□□ -0.13
TPM3-211ENST00000368531 SLCO3A1Q9UIG8 710 aa14.22□□□□□ -0.13
TPM3-211ENST00000368531 SLC25A13Q9UJS0 675 aa14.22□□□□□ -0.13
TPM3-211ENST00000368531 STARD13Q9Y3M8 1113 aa14.22□□□□□ -0.13
TPM3-211ENST00000368531 HEY1Q9Y5J3 304 aa14.22□□□□□ -0.13
TPM3-211ENST00000368531 hCG_1818297A0A087WSY0 165 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 KCNK3O14649 394 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 KDELR3O43731 214 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 MT-CO1P00395 513 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 ASLP04424 464 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 HLA-EP13747 358 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 SERPINB6P35237 376 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 IL12RB1P42701 662 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 ST8SIA6P61647 398 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 GBE1Q04446 702 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 SULT2A1Q06520 285 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 ADCY2Q08462 1091 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 TFDP2Q14188 446 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 GAS6Q14393 721 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 PAFAH1B3Q15102 231 aaKnown RBP14.21□□□□□ -0.13
TPM3-211ENST00000368531 PTPRNQ16849 979 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 PARP15Q460N3 678 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 ACCSLQ4AC99 568 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 CCDC181Q5TID7 509 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 SDE2Q6IQ49 451 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 SERPINA13PQ6UXR4 307 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 ARHGAP36Q6ZRI8 547 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 LZTR1Q8N653 840 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 TMEM105Q8N8V8 129 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 IL17RCQ8NAC3 791 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 HAUS1Q96CS2 278 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 HERPUD2Q9BSE4 406 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 TLR10Q9BXR5 811 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 ACE2Q9BYF1 805 aaPredicted RBP14.21□□□□□ -0.13
TPM3-211ENST00000368531 OSBPL8Q9BZF1 889 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 CHRDQ9H2X0 955 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 MTG2Q9H4K7 406 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 THAP10Q9P2Z0 257 aaPredicted RBP14.21□□□□□ -0.13
TPM3-211ENST00000368531 SAE1Q9UBE0 346 aaPredicted RBP14.21□□□□□ -0.13
TPM3-211ENST00000368531 RAD54BQ9Y620 910 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 STON1Q9Y6Q2 735 aa14.21□□□□□ -0.13
TPM3-211ENST00000368531 MUC22E2RYF6 1773 aaPredicted RBP14.2□□□□□ -0.14
TPM3-211ENST00000368531 TTC34A8MYJ7 566 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 ZNF487B1APH4 448 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 J3KR12 359 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 K7ERQ8 282 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 SGK1O00141 431 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 BNIP3LO60238 219 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 CHRM1P11229 460 aaPredicted RBP14.2□□□□□ -0.14
TPM3-211ENST00000368531 PRKCHP24723 683 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 MSNP26038 577 aaKnown RBP14.2□□□□□ -0.14
TPM3-211ENST00000368531 NTSR1P30989 418 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 CXCR5P32302 372 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 NNMTP40261 264 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 COPS2P61201 443 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 ARF5P84085 180 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 SLC10A2Q12908 348 aaPredicted RBP14.2□□□□□ -0.14
TPM3-211ENST00000368531 MTAPQ13126 283 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 SERINC3Q13530 473 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 TAZQ16635 292 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 HS1BP3Q53T59 392 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 SEL1L2Q5TEA6 688 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 AFMIDQ63HM1 303 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 SLC9A4Q6AI14 798 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 B4GALNT4Q76KP1 1039 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 BMP8AQ7Z5Y6 402 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 VSIG1Q86XK7 387 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 SYNPOQ8N3V7 929 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 PLD5Q8N7P1 536 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 ATP11CQ8NB49 1132 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 CCDC26Q8TAB7 109 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 MRGPRX3Q96LB0 322 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 SP110Q9HB58 689 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 SPATA6Q9NWH7 488 aaPredicted RBP14.2□□□□□ -0.14
TPM3-211ENST00000368531 C2orf42Q9NWW7 574 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.2□□□□□ -0.14
TPM3-211ENST00000368531 ZKSCAN5Q9Y2L8 839 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 JRKLQ9Y4A0 524 aa14.2□□□□□ -0.14
TPM3-211ENST00000368531 ADAM23O75077 832 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 ATG13O75143 517 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 ZMPSTE24O75844 475 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 ATP1A1P05023 1023 aaKnown RBP14.19□□□□□ -0.14
TPM3-211ENST00000368531 SRPRAP08240 638 aaKnown RBP14.19□□□□□ -0.14
TPM3-211ENST00000368531 HOXB2P14652 356 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 HNRNPLP14866 589 aaKnown RBP eCLIP14.19□□□□□ -0.14
TPM3-211ENST00000368531 PECAM1P16284 738 aaPredicted RBP14.19□□□□□ -0.14
TPM3-211ENST00000368531 ZFXP17010 805 aaPredicted RBP14.19□□□□□ -0.14
TPM3-211ENST00000368531 AVPR2P30518 371 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 RPS9P46781 194 aaKnown RBP14.19□□□□□ -0.14
TPM3-211ENST00000368531 PPP2R5EQ16537 467 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 TMEM31Q5JXX7 168 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 EOGTQ5NDL2 527 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms