RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 ZNF280DQ6N043 979 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 RINLQ6ZS11 566 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 RBM15BQ8NDT2 890 aaKnown RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 GANCQ8TET4 914 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 FBXO44Q9H4M3 255 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 COG4Q9H9E3 785 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 ZNF214Q9UL59 606 aaPredicted RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 CORO1CQ9ULV4 474 aaPredicted RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 RAP2CQ9Y3L5 183 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 AP4S1Q9Y587 144 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 INPP4BO15327 924 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 SNUPNO95149 360 aaKnown RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 ASPAP45381 313 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 RAB27AP51159 221 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 MSLNQ13421 630 aaPredicted RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 ARHGEF7Q14155 803 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 NR6A1Q15406 480 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 SAMD4BQ5PRF9 694 aaKnown RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 PRAMEF19Q5SWL8 479 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 LRRC8BQ6P9F7 803 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 STRADAQ7RTN6 431 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 HORMAD1Q86X24 394 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 BANPQ8N9N5 519 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 SH3KBP1Q96B97 665 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 MPP4Q96JB8 637 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 CLPTM1LQ96KA5 538 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 C7orf26Q96N11 449 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 SEPHS2Q99611 448 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 MTG1Q9BT17 334 aaPredicted RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 DUSP16Q9BY84 665 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 CLPBQ9H078 707 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 ALG9Q9H6U8 611 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 SH3BP1Q9Y3L3 701 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 TRPV2Q9Y5S1 764 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 SPTLC1O15269 473 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 TGDSO95455 350 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 MBTD1Q05BQ5 628 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 SLC39A12Q504Y0 691 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 TAGAPQ8N103 731 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 MYO1HQ8N1T3 1032 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 SPATA6LQ8N4H0 392 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 SNRNP27Q8WVK2 155 aaKnown RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 NDRG1Q92597 394 aaKnown RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 RMND5BQ96G75 393 aaPredicted RBP11.87□□□□□ -0.51
COPA-202ENST00000368069 GOLGA2P5Q9HBQ8 144 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 RHBDL2Q9NX52 303 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 XPR1Q9UBH6 696 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 KCNH4Q9UQ05 1017 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 PCDHB5Q9Y5E4 795 aa11.87□□□□□ -0.51
COPA-202ENST00000368069 ZNF536O15090 1300 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 RGSL1A5PLK6 1076 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 C2CD4BA6NLJ0 364 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 CCDC166P0CW27 439 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 FCGR1AP12314 374 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 FGFR3P22607 806 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 LRPAP1P30533 357 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 CTBP1Q13363 440 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 POLD3Q15054 466 aaPredicted RBP11.86□□□□□ -0.51
COPA-202ENST00000368069 FSCN1Q16658 493 aaKnown RBP11.86□□□□□ -0.51
COPA-202ENST00000368069 RNF180Q86T96 592 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 LMO3Q8TAP4 145 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 DLG3Q92796 817 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 DACH2Q96NX9 599 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 QKIQ96PU8 341 aaKnown RBP eCLIP11.86□□□□□ -0.515e-8■■■■□ 20.4
COPA-202ENST00000368069 NDNQ99608 321 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 PRPF18Q99633 342 aaKnown RBP11.86□□□□□ -0.51
COPA-202ENST00000368069 TLR8Q9NR97 1041 aaKnown RBP11.86□□□□□ -0.51
COPA-202ENST00000368069 ABCC13Q9NSE7 274 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 ZNF229Q9UJW7 825 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 MYH7P12883 1935 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 M0R3G1 203 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 FGF10O15520 208 aaPredicted RBP11.86□□□□□ -0.51
COPA-202ENST00000368069 LTA4HP09960 611 aaKnown RBP11.86□□□□□ -0.51
COPA-202ENST00000368069 ATP5F1P24539 256 aaPredicted RBP11.86□□□□□ -0.51
COPA-202ENST00000368069 DMC1Q14565 340 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 CERCAMQ5T4B2 595 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 ANKS6Q68DC2 871 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 PLD3Q8IV08 490 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 HS6ST3Q8IZP7 471 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 MIER2Q8N344 545 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 SLC35B2Q8TB61 432 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 RCN3Q96D15 328 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 CDH19Q9H159 772 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 ARHGEF3Q9NR81 526 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 PCDHB8Q9UN66 801 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 SOWAHBA6NEL2 793 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 CFAP99D6REC4 459 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 ATXN8OSP0DMR3 200 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 ATP6V1B2P21281 511 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 KLRC2P26717 231 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 IFNA8P32881 189 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 FCGRTP55899 365 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 RAB10P61026 200 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 KRT72Q14CN4 511 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 NRF1Q16656 503 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 LIPMQ5VYY2 423 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 PRMT9Q6P2P2 845 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 LPCAT2Q7L5N7 544 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 CARNMT1Q8N4J0 409 aa11.86□□□□□ -0.51
COPA-202ENST00000368069 GLIS1Q8NBF1 620 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms