RNA–Protein interactions for RNA: ENST00000367338.7

CACNA1S-202, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1S, Length 5,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-202ENST00000367338 TINF2Q9BSI4 451 aa9.91□□□□□ -0.82
CACNA1S-202ENST00000367338 YIPF2Q9BWQ6 316 aa9.91□□□□□ -0.82
CACNA1S-202ENST00000367338 FBXO44Q9H4M3 255 aa9.91□□□□□ -0.82
CACNA1S-202ENST00000367338 ABI2Q9NYB9 513 aaPredicted RBP9.91□□□□□ -0.82
CACNA1S-202ENST00000367338 C6orf203Q9P0P8 240 aaPredicted RBP9.91□□□□□ -0.82
CACNA1S-202ENST00000367338 TSR3Q9UJK0 312 aaKnown RBP9.91□□□□□ -0.82
CACNA1S-202ENST00000367338 CDH9Q9ULB4 789 aa9.91□□□□□ -0.82
CACNA1S-202ENST00000367338 E9PBE3 544 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 F5H5T6 163 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 KLHL41O60662 606 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 CRTAMO95727 393 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 MYH8P13535 1937 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 YBX3P16989 372 aaKnown RBP eCLIP9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 CEP78Q5JTW2 689 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 FNBP1LQ5T0N5 605 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 IZUMO2Q6UXV1 221 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 MYO1HQ8N1T3 1032 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 B3GALNT2Q8NCR0 500 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 VPS33AQ96AX1 596 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 PDZD7Q9H5P4 517 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 ARMC7Q9H6L4 198 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 IPPQ9Y573 584 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 SLC15A5A6NIM6 579 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 SMIM10L2AP0DMW4 78 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 SMIM10L2BP0DMW5 78 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 PSMB4P28070 264 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 TKTP29401 623 aaKnown RBP9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 CRHR1P34998 444 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 NUP62P37198 522 aaPredicted RBP9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 RAB14P61106 215 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 MAD2L1Q13257 205 aaPredicted RBP9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 PCID2Q5JVF3 399 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 ANKS6Q68DC2 871 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 RNF180Q86T96 592 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 LRRC49Q8IUZ0 686 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 DEFB107AQ8IZN7 70 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 SOCS4Q8WXH5 440 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 OSBPL10Q9BXB5 764 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 OSBPL7Q9BZF2 842 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 AP3M1Q9Y2T2 418 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 ZNF711Q9Y462 761 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 PTCH2Q9Y6C5 1203 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 DGKIO75912 1065 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 PTPN9P43378 593 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 RENBPP51606 427 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 CCDC142Q17RM4 750 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 SH3D19Q5HYK7 790 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 TRIM48Q8IWZ4 208 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 MICU2Q8IYU8 434 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 C1orf127Q8N9H9 656 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 ASB2Q96Q27 587 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 FZD8Q9H461 694 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 DYRK1BQ9Y463 629 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 SCN7AQ01118 1682 aa9.9□□□□□ -0.82
CACNA1S-202ENST00000367338 DOCK2Q92608 1830 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 FAM237BA0A1B0GVD1 139 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 SMIM35A0A1B0GVV1 85 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 HMBSP08397 361 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 JAK1P23458 1154 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 KLRC2P26717 231 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 MZF1P28698 734 aaPredicted RBP9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 MRPS5P82675 430 aaKnown RBP9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 PLOD1Q02809 727 aaPredicted RBP9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 CHRNB3Q05901 458 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 BST1Q10588 318 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 CDH18Q13634 790 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 INSCQ1MX18 579 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 SLC25A52Q3SY17 297 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 C9orf57Q5W0N0 161 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 SLC39A4Q6P5W5 647 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 IYDQ6PHW0 289 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 RELL1Q8IUW5 271 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 HERC6Q8IVU3 1022 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 CENPLQ8N0S6 344 aaPredicted RBP9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 CYP4Z2PQ8N1L4 340 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 C7orf26Q96N11 449 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 DUSP16Q9BY84 665 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 ULBP1Q9BZM6 244 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 SDCBP2Q9H190 292 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 ABCC13Q9NSE7 274 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 RBM22Q9NW64 420 aaKnown RBP eCLIP9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 RABGEF1Q9UJ41 708 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 RNF112Q9ULX5 631 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 SLC12A4Q9UP95 1085 aa9.9□□□□□ -0.83
CACNA1S-202ENST00000367338 LIN7AO14910 233 aaPredicted RBP9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 BMP10O95393 424 aa9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 ITGALP20701 1170 aa9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 ACAT1P24752 427 aaKnown RBP9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 MSLNQ13421 630 aaPredicted RBP9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 CASP10Q92851 521 aa9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 QKIQ96PU8 341 aaKnown RBP eCLIP9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 OLFM1Q99784 485 aa9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 MRPL45Q9BRJ2 306 aaKnown RBP9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 GPAMQ9HCL2 828 aa9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 EXOSC4Q9NPD3 245 aaKnown RBP9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 RNASEH1O60930 286 aaKnown RBP9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 USP2O75604 605 aaPredicted RBP9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 GRK3P35626 688 aa9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 ERFP50548 548 aa9.89□□□□□ -0.83
CACNA1S-202ENST00000367338 SLC9A5Q14940 896 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms