RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PLEKHF1Q96S99 279 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 RBM4BQ9BQ04 359 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 RBM4Q9BWF3 364 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CRISPLD1Q9H336 500 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ACSS2Q9NR19 701 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TAS2R7Q9NYW3 318 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 MARK1Q9P0L2 795 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 MEMO1Q9Y316 297 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 FIS1Q9Y3D6 152 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 NOL4O94818 638 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PTPN2P17706 415 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SLC9C2Q5TAH2 1124 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SLC25A25Q6KCM7 469 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF473Q8WTR7 871 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 RUVBL2Q9Y230 463 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SPARCP09486 303 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 MXD4Q14582 209 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 GRHL2Q6ISB3 625 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SUN5Q8TC36 379 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 MED11Q9P086 117 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 DENRO43583 198 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TSPAN1O60635 241 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 RDH16O75452 317 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CAMTA2O94983 1202 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 GJB6O95452 261 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CYP11B2P19099 503 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 NME5P56597 212 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 C16orf46Q6P387 395 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 NXNL1Q96CM4 212 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 AAR2Q9Y312 384 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PCDHB3Q9Y5E6 796 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 A0A0J9YVX5 310 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PNMA6FA0A0J9YX94 578 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 LRRC72A6NJI9 287 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 FTCDO95954 541 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 NDST1P52848 882 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 DCAF6Q58WW2 860 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 METAP1DQ6UB28 335 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 STRBPQ96SI9 672 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 VAV3Q9UKW4 847 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ATP1A1P05023 1023 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PDK4Q16654 411 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PPP2R2DQ66LE6 453 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PLEKHM3Q6ZWE6 761 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PURBQ96QR8 312 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TMBIM4Q9HC24 238 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 COMMD8Q9NX08 183 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 COQ3Q9NZJ6 369 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 DUSP10Q9Y6W6 482 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CLOCKO15516 846 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 MAGOHP61326 146 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 NCCRP1Q6ZVX7 275 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ADSSL1Q8N142 457 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SPATA6LQ8N4H0 392 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ARHGEF35A5YM69 484 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 WDR64B1ANS9 1081 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 AGR2O95994 175 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CCNA1P78396 465 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SLC30A10Q6XR72 485 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 NKD2Q969F2 451 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 KCTD12Q96CX2 325 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ERMAPQ96PL5 475 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PELOQ9BRX2 385 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 INMTO95050 263 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 FAM228BP0C875 321 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF3P17036 446 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 GALNT3Q14435 633 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 LYPLAL1Q5VWZ2 237 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 MFSD2AQ8NA29 543 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PYDC1Q8WXC3 89 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CPXM1Q96SM3 734 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 HEMGNQ9BXL5 484 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 C11orf49Q9H6J7 331 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 RGS18Q9NS28 235 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ASH2LQ9UBL3 628 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ACSL5Q9ULC5 683 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 FGGP02679 453 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 AOC1P19801 751 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ITGAXP20702 1163 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ARFIP2P53365 341 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SOWAHDA6NJG2 315 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SNX3O60493 162 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CCNDBP1O95273 360 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 EPCAMP16422 314 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 MBTD1Q05BQ5 628 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 HIPK1Q86Z02 1210 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF507Q8TCN5 953 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PPM1MQ96MI6 270 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SYTL2Q9HCH5 934 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 RNF19AQ9NV58 838 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 SELENOFO60613 162 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 PKLRP30613 574 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 UBXN2AP68543 259 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 RC3H1Q5TC82 1133 aaKnown RBP3.81□□□□□ -1.8
SYNE1-207ENST00000367255 ANKRD22Q5VYY1 191 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 DPP9Q86TI2 863 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CEP76Q8TAP6 659 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 MYLPFQ96A32 169 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 MRIQ9BWK5 157 aa3.81□□□□□ -1.8
SYNE1-207ENST00000367255 CEP170Q5SW79 1584 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms