RNA–Protein interactions for RNA: ENST00000366872.9

CAPN8-201, Transcript of calpain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN8, Length 2,427 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-201ENST00000366872 ZNF33AQ06730 810 aa13.03□□□□□ -0.32
CAPN8-201ENST00000366872 PPIDQ08752 370 aaKnown RBP13.03□□□□□ -0.32
CAPN8-201ENST00000366872 PCBP1Q15365 356 aaKnown RBP eCLIP13.03□□□□□ -0.32
CAPN8-201ENST00000366872 LSM12Q3MHD2 195 aaKnown RBP13.03□□□□□ -0.32
CAPN8-201ENST00000366872 KLC3Q6P597 504 aa13.03□□□□□ -0.32
CAPN8-201ENST00000366872 SNX32Q86XE0 403 aa13.03□□□□□ -0.32
CAPN8-201ENST00000366872 TMEM102Q8N9M5 508 aaPredicted RBP13.03□□□□□ -0.32
CAPN8-201ENST00000366872 STYXQ8WUJ0 223 aa13.03□□□□□ -0.32
CAPN8-201ENST00000366872 TRAPPC12Q8WVT3 735 aa13.03□□□□□ -0.32
CAPN8-201ENST00000366872 NPY6RQ99463 290 aa13.03□□□□□ -0.32
CAPN8-201ENST00000366872 FDXACB1Q9BRP7 624 aaPredicted RBP13.03□□□□□ -0.32
CAPN8-201ENST00000366872 B3GNT5Q9BYG0 378 aa13.03□□□□□ -0.32
CAPN8-201ENST00000366872 SQORQ9Y6N5 450 aa13.03□□□□□ -0.32
CAPN8-201ENST00000366872 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
CAPN8-201ENST00000366872 A0A1B0GVG6 124 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 GRID2O43424 1007 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 CYP2B6P20813 491 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 NOS2P35228 1153 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 MLH1P40692 756 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 MYBPC1Q00872 1141 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 TRAP1Q12931 704 aaKnown RBP13.02□□□□□ -0.32
CAPN8-201ENST00000366872 MPP3Q13368 585 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 TTLL12Q14166 644 aaPredicted RBP13.02□□□□□ -0.32
CAPN8-201ENST00000366872 CMC1Q7Z7K0 106 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 SNX27Q96L92 541 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 UHRF1Q96T88 793 aaPredicted RBP13.02□□□□□ -0.32
CAPN8-201ENST00000366872 ACE2Q9BYF1 805 aaPredicted RBP13.02□□□□□ -0.32
CAPN8-201ENST00000366872 PRDM12Q9H4Q4 367 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 SETD4Q9NVD3 440 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 GDAP2Q9NXN4 497 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 CDYLQ9Y232 598 aa13.02□□□□□ -0.32
CAPN8-201ENST00000366872 TRIM38O00635 465 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 TXNDC9O14530 226 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 CCDC166P0CW27 439 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 SEMA3BQ13214 749 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 NADK2Q4G0N4 442 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 OTUD1Q5VV17 481 aaPredicted RBP13.02□□□□□ -0.33
CAPN8-201ENST00000366872 ITPRIPL1Q6GPH6 555 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 KLHDC10Q6PID8 442 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 SAMD7Q7Z3H4 446 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 CNTN4Q8IWV2 1026 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 BEST2Q8NFU1 509 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 KCTD13Q8WZ19 329 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 ZNF669Q96BR6 464 aaPredicted RBP13.02□□□□□ -0.33
CAPN8-201ENST00000366872 ASB9Q96DX5 294 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 MPP4Q96JB8 637 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 SLC2A13Q96QE2 648 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 CDRT15Q96T59 188 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 HAUS8Q9BT25 410 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 SENP6Q9GZR1 1112 aaPredicted RBP13.02□□□□□ -0.33
CAPN8-201ENST00000366872 GBA3Q9H227 469 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 RHOJQ9H4E5 214 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 ZNF358Q9NW07 568 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 SNX9Q9Y5X1 595 aa13.02□□□□□ -0.33
CAPN8-201ENST00000366872 TRPC5OSA6NMA1 111 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 DDHD2O94830 711 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 SRGAP2BP0DMP2 458 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 XRCC1P18887 633 aaPredicted RBP13.01□□□□□ -0.33
CAPN8-201ENST00000366872 TFEBP19484 476 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 PTPN3P26045 913 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 HSPA1LP34931 641 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 ERFP50548 548 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 DNAJB13P59910 316 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 CEACAM7Q14002 265 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 TTLL4Q14679 1199 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 UGP2Q16851 508 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.01□□□□□ -0.33
CAPN8-201ENST00000366872 RBM44Q6ZP01 1051 aaKnown RBP13.01□□□□□ -0.33
CAPN8-201ENST00000366872 TMEM130Q8N3G9 435 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 METTL25Q8N6Q8 603 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 LRRN4Q8WUT4 740 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 HDAC11Q96DB2 347 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 VPS39Q96JC1 886 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 ZNF597Q96LX8 424 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 OXCT2Q9BYC2 517 aaPredicted RBP13.01□□□□□ -0.33
CAPN8-201ENST00000366872 WDR41Q9HAD4 459 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 FAM49BQ9NUQ9 324 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 PIM2Q9P1W9 311 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 EPS15L1Q9UBC2 864 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 STAP1Q9ULZ2 295 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 MFHAS1Q9Y4C4 1052 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 C9IYK1 514 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 AIM2O14862 343 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 SBK3P0C264 359 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 INSRRP14616 1297 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 ATXN1P54253 815 aaKnown RBP13.01□□□□□ -0.33
CAPN8-201ENST00000366872 GJA9P57773 515 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 TUBA4AP68366 448 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 MAPRE2Q15555 327 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 TBC1D25Q3MII6 688 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 ALKAL1Q6UXT8 129 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 CHSY3Q70JA7 882 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 KCNMB4Q86W47 210 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 CHERPQ8IWX8 916 aaKnown RBP13.01□□□□□ -0.33
CAPN8-201ENST00000366872 TNS4Q8IZW8 715 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 EMID1Q96A84 441 aaPredicted RBP13.01□□□□□ -0.33
CAPN8-201ENST00000366872 CPB2Q96IY4 423 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 FAR2Q96K12 515 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 TSNARE1Q96NA8 513 aa13.01□□□□□ -0.33
CAPN8-201ENST00000366872 AGAP3Q96P47 875 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms