RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 MFN1Q8IWA4 741 aa8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 CFAP52Q8N1V2 620 aa8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 ARL14Q8N4G2 192 aa8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 FAM26EQ8N5C1 309 aa8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 KDM1BQ8NB78 822 aa8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 ZNF548Q8NEK5 533 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 WDR36Q8NI36 951 aaKnown RBP8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 ZNF564Q8TBZ8 553 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 CALN1Q9BXU9 219 aa8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 ULBP1Q9BZM6 244 aa8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 SEPT3Q9UH03 358 aa8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 DMTF1Q9Y222 760 aa8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 HBS1LQ9Y450 684 aaKnown RBP8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 OTOGQ6ZRI0 2925 aa8.77□□□□□ -1.01
HMGB1P39-201ENST00000366304 CCDC187A0A096LP49 1063 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 MUSKO15146 869 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 EIF3DO15371 548 aaKnown RBP eCLIP8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 STX6O43752 255 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 RNGTTO60942 597 aaKnown RBP8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 PPFIA2O75334 1257 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 ZBED1O96006 694 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 HLA-DRAP01903 254 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 ASLP04424 464 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 CASP1P29466 404 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 UGT1A5P35504 534 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 ST8SIA6P61647 398 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 ECT2LQ008S8 904 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 SGSM1Q2NKQ1 1148 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 DEFB133Q30KQ1 61 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 ZNF394Q53GI3 561 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 MPP7Q5T2T1 576 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 PIP5KL1Q5T9C9 394 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 BSPRYQ5W0U4 402 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 OR6B2Q6IFH4 312 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 SV2AQ7L0J3 742 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 ZFAND4Q86XD8 727 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 CCDC65Q8IXS2 484 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 BMFQ96LC9 184 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 NT5C1AQ9BXI3 368 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 GPR27Q9NS67 375 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 DNAJC28Q9NX36 388 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 CCDC39Q9UFE4 941 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 XPO7Q9UIA9 1087 aaKnown RBP8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 PNMA8BQ9ULN7 279 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 ZFR2Q9UPR6 939 aaKnown RBP8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 PCDHGA7Q9Y5G6 932 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 SRPRBQ9Y5M8 271 aaKnown RBP8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 UBE4BO95155 1302 aa8.76□□□□□ -1.01
HMGB1P39-201ENST00000366304 ZFC3H1O60293 1989 aaKnown RBP8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 NYNRINQ9P2P1 1898 aaKnown RBP8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 NF1P21359 2839 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 ITPR3Q14573 2671 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 A0A1W2PQU0 124 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 EME2A4GXA9 379 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 POM121BA6NF01 834 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 J3QL48 77 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 AGRPO00253 132 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 NTN3O00634 580 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 RAD51BO15315 384 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 ST8SIA5O15466 376 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 SPINT1O43278 529 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 ACSL4O60488 711 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 EXOC3O60645 756 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 MAGEC1O60732 1142 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 GCATO75600 419 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 LATS1O95835 1130 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 F12P00748 615 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 CTSLP07711 333 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 SRPRAP08240 638 aaKnown RBP8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 SLFN14P0C7P3 912 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 CASRP41180 1078 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 STAT6P42226 847 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 FGL2Q14314 439 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 ELAVL3Q14576 367 aaKnown RBP8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 SETMARQ53H47 684 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 FAM26FQ5R3K3 315 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 SEL1L3Q68CR1 1132 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 ZCCHC8Q6NZY4 707 aaKnown RBP8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 FAM173BQ6P4H8 233 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 Q6ZSR6 202 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 ABI3BPQ7Z7G0 1075 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 C14orf80Q86SX3 495 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 C12orf56Q8IXR9 622 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 SLC35F3Q8IY50 421 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 ARHGAP18Q8N392 663 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 CARNMT1Q8N4J0 409 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 PDILTQ8N807 584 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 SLC4A11Q8NBS3 891 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 EHBP1Q8NDI1 1231 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 GRAMD1AQ96CP6 724 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 FOXP3Q9BZS1 431 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 NUCKS1Q9H1E3 243 aaKnown RBP8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 TCEAL2Q9H3H9 227 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 USP29Q9HBJ7 922 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 DMAC2Q9NW81 257 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 FOXJ2Q9P0K8 574 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 PLEKHB1Q9UF11 243 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 ACSL6Q9UKU0 697 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 PPM1HQ9ULR3 514 aa8.75□□□□□ -1.01
HMGB1P39-201ENST00000366304 TPX2Q9ULW0 747 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms