RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 POLR3FQ9H1D9 316 aaPredicted RBP5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 TTC12Q9H892 705 aaPredicted RBP5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 TBC1D17Q9HA65 648 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 ANKEF1Q9NU02 776 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 MOCS1Q9NZB8 636 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 EPS15L1Q9UBC2 864 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 WNT16Q9UBV4 365 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 ADAM28Q9UKQ2 775 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 PCDHA12Q9UN75 941 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 ATP8A1Q9Y2Q0 1164 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 GPR45Q9Y5Y3 372 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 R4GN57 208 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 ZFHX2Q9C0A1 2572 aaPredicted RBP5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 COL4A3Q01955 1670 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 VWA8A3KMH1 1905 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 MIA3Q5JRA6 1907 aa5.68□□□□□ -1.5
RNU4-4P-201ENST00000364588 PTPRZ1P23471 2315 aaPredicted RBP5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 BTBD18B2RXH4 712 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 EPB41L2O43491 1005 aaKnown RBP5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 NEMFO60524 1076 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 TADA2AO75478 443 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 LYPLA2O95372 231 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 LARGE1O95461 756 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 RBP3P10745 1247 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 LAMP2P13473 410 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 OSMP13725 252 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 FDPSP14324 419 aaKnown RBP5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 PTPN7P35236 360 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 PER3P56645 1201 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 POU5F1BQ06416 359 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 MGAT2Q10469 447 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 GRIK3Q13003 919 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 HTR4Q13639 388 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 FAM171A1Q5VUB5 890 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 CYP26C1Q6V0L0 522 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 GRASPQ7Z6J2 395 aaPredicted RBP5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 DDX42Q86XP3 938 aaKnown RBP eCLIP5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 CEP57Q86XR8 500 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 XYLT1Q86Y38 959 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 DRC7Q8IY82 874 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 CNTD1Q8N815 330 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 HSD17B14Q9BPX1 270 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 RPP25Q9BUL9 199 aaKnown RBP5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 FAM126AQ9BYI3 521 aaPredicted RBP5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 CXCL16Q9H2A7 254 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 TMEM60Q9H2L4 133 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 PLEKHA4Q9H4M7 779 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 ARHGEF3Q9NR81 526 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 SLC2A4RGQ9NR83 387 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 ZDHHC7Q9NXF8 308 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 FNIP2Q9P278 1114 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 DCHS1Q96JQ0 3298 aa5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 SF3B1O75533 1304 aaKnown RBP eCLIP5.67□□□□□ -1.5
RNU4-4P-201ENST00000364588 FANCMQ8IYD8 2048 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 NOTCH4Q99466 2003 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 A0A1B0GUA9 196 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 GAGE12BA1L429 117 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 GAGE12HA6NDE8 117 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 PTGESO14684 152 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 CCL16O15467 120 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 ADAM12O43184 909 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 TEX33O43247 280 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 JAK2O60674 1132 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 MED24O75448 989 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 ADSLP30566 484 aaPredicted RBP5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 APOBEC3AP31941 199 aaPredicted RBP5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 INHBCP55103 352 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 CLRN1P58418 232 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 GPC5P78333 572 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 GUCY1B3Q02153 619 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 PSMD5Q16401 504 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 ME3Q16798 604 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 BMT2Q1RMZ1 405 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 PPM1LQ5SGD2 360 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 LIN9Q5TKA1 542 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 DCLRE1AQ6PJP8 1040 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 PARM1Q6UWI2 310 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 GDF7Q7Z4P5 450 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 ZBTB8OSQ8IWT0 167 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 DIS3L2Q8IYB7 885 aaKnown RBP5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 HDAC7Q8WUI4 952 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 WASF1Q92558 559 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 HOXB13Q92826 284 aaPredicted RBP5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 FGF14Q92915 247 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 MTMR9Q96QG7 549 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 CLSTN3Q9BQT9 956 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 TTPALQ9BTX7 342 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 NFKBIZQ9BYH8 718 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 RHOBTB2Q9BYZ6 727 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 PDZD7Q9H5P4 517 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 POLD4Q9HCU8 107 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 PRMT7Q9NVM4 692 aaPredicted RBP5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 GPRC5BQ9NZH0 403 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 ING1Q9UK53 422 aaPredicted RBP5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 FBXW11Q9UKB1 542 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 GDAQ9Y2T3 454 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 FAM186AA6NE01 2351 aa5.66□□□□□ -1.5
RNU4-4P-201ENST00000364588 ANHXE9PGG2 379 aa5.65□□□□□ -1.5
RNU4-4P-201ENST00000364588 RNASET2O00584 256 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms