RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 ZBTB9Q96C00 473 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 SERPINB12Q96P63 405 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 WDR83Q9BRX9 315 aaKnown RBP17.43■□□□□ 0.38
TPM1-205ENST00000357980 FRMD8Q9BZ67 464 aaPredicted RBP17.43■□□□□ 0.38
TPM1-205ENST00000357980 SFXN1Q9H9B4 322 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 SAYSD1Q9NPB0 183 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 NINJ2Q9NZG7 142 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 ZMYM5Q9UJ78 669 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 TBC1D30Q9Y2I9 924 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 SH3BP1Q9Y3L3 701 aa17.43■□□□□ 0.38
TPM1-205ENST00000357980 F5H423 210 aaPredicted RBP17.42■□□□□ 0.38
TPM1-205ENST00000357980 J3KR12 359 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 ZNF197O14709 1029 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 ALOX15BO15296 676 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 CACNG3O60359 315 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 CEBPBP17676 345 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 ACVRL1P37023 503 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 MAGEA3P43357 314 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 GNA12Q03113 381 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 PDIA2Q13087 525 aaKnown RBP17.42■□□□□ 0.38
TPM1-205ENST00000357980 SLC29A2Q14542 456 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 DENND2CQ68D51 928 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 ITPRIPL1Q6GPH6 555 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 SETD3Q86TU7 594 aaPredicted RBP17.42■□□□□ 0.38
TPM1-205ENST00000357980 PDIK1LQ8N165 341 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 HJURPQ8NCD3 748 aaPredicted RBP17.42■□□□□ 0.38
TPM1-205ENST00000357980 SH3RF2Q8TEC5 729 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 ARHGEF2Q92974 986 aaKnown RBP17.42■□□□□ 0.38
TPM1-205ENST00000357980 SH3GL2Q99962 352 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 MAGEH1Q9H213 219 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 RSPH14Q9UHP6 348 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 A0A0D9SEW6 157 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 E2F8A0AVK6 867 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 ILVBLA1L0T0 632 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 E7EVH7 732 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 BANF1O75531 89 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 PRAMEF12O95522 483 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 NFKB1P19838 968 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 FAM193AP78312 1265 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 HNRNPDQ14103 355 aaKnown RBP17.42■□□□□ 0.38
TPM1-205ENST00000357980 KYNUQ16719 465 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 ANO4Q32M45 955 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 C6orf118Q5T5N4 469 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 CXorf57Q6NSI4 855 aaKnown RBP17.42■□□□□ 0.38
TPM1-205ENST00000357980 TMC5Q6UXY8 1006 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 KLHDC8BQ8IXV7 354 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 OR2W6PQ8NHA6 318 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 C9orf72Q96LT7 481 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 ZSWIM3Q96MP5 696 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 PRO3102Q9H379 93 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 TDP1Q9NUW8 608 aa17.42■□□□□ 0.38
TPM1-205ENST00000357980 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.41■□□□□ 0.38
TPM1-205ENST00000357980 H3BQF6 201 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 ACSL3O95573 720 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 GLP2RO95838 553 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 HOXD9P28356 352 aaPredicted RBP17.41■□□□□ 0.38
TPM1-205ENST00000357980 TNK2Q07912 1038 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 IL10RBQ08334 325 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 ZNF177Q13360 481 aaPredicted RBP17.41■□□□□ 0.38
TPM1-205ENST00000357980 KCTD11Q693B1 232 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 ZBED8Q8IZ13 594 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 AGGF1Q8N302 714 aaeCLIP17.41■□□□□ 0.38
TPM1-205ENST00000357980 TEX26Q8N6G2 289 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 PDCD7Q8N8D1 485 aaKnown RBP17.41■□□□□ 0.38
TPM1-205ENST00000357980 TTC16Q8NEE8 873 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 USP33Q8TEY7 942 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 SP110Q9HB58 689 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 PIDD1Q9HB75 910 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 PDFQ9HBH1 243 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 DZANK1Q9NVP4 752 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 SZT2Q5T011 3432 aa17.41■□□□□ 0.38
TPM1-205ENST00000357980 PRAMEF11O60813 436 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 TBL1XO60907 577 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 AVILO75366 819 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 SYF2O95926 243 aaKnown RBP17.4■□□□□ 0.38
TPM1-205ENST00000357980 SHBGP04278 402 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 HLA-DQB2P05538 268 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 IFNAR2P48551 515 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 ZNF844Q08AG5 666 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 MTM1Q13496 603 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 HP1BP3Q5SSJ5 553 aaPredicted RBP17.4■□□□□ 0.38
TPM1-205ENST00000357980 RNF43Q68DV7 783 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 TMEM184AQ6ZMB5 413 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 TDRD5Q8NAT2 981 aaKnown RBP17.4■□□□□ 0.38
TPM1-205ENST00000357980 OR7D4Q8NG98 312 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 ITFG1Q8TB96 612 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 ING5Q8WYH8 240 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 PPP2R3CQ969Q6 453 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 TMA16Q96EY4 203 aaKnown RBP17.4■□□□□ 0.38
TPM1-205ENST00000357980 RUFY1Q96T51 708 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 MLPHQ9BV36 600 aaPredicted RBP17.4■□□□□ 0.38
TPM1-205ENST00000357980 RBM22Q9NW64 420 aaKnown RBP eCLIP17.4■□□□□ 0.38
TPM1-205ENST00000357980 MRPS23Q9Y3D9 190 aaKnown RBP17.4■□□□□ 0.38
TPM1-205ENST00000357980 AP2A1O95782 977 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 RHOCP08134 193 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 TCF3P15923 654 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 GRIA1P42261 906 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 RENBPP51606 427 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 HYAL1Q12794 435 aa17.4■□□□□ 0.38
TPM1-205ENST00000357980 USP4Q13107 963 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms