RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 GLT6D1Q7Z4J2 308 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 NET1Q7Z628 596 aaPredicted RBP11.94□□□□□ -0.5
COL9A1-202ENST00000357250 SNX32Q86XE0 403 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 CDK20Q8IZL9 346 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 PRELID2Q8N945 189 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 ANKRD52Q8NB46 1076 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 B3GALNT2Q8NCR0 500 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 LNX1Q8TBB1 728 aaPredicted RBP11.94□□□□□ -0.5
COL9A1-202ENST00000357250 FAM45AQ8TCE6 357 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 USP6NLQ92738 828 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 PHF21BQ96EK2 531 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 CDCA5Q96FF9 252 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 INPP4AQ96PE3 977 aaPredicted RBP11.94□□□□□ -0.5
COL9A1-202ENST00000357250 APBA2Q99767 749 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 PDZK1P1A8MUH7 402 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 RNF225M0QZC1 329 aaPredicted RBP11.93□□□□□ -0.5
COL9A1-202ENST00000357250 CCNT2O60583 730 aaKnown RBP11.93□□□□□ -0.5
COL9A1-202ENST00000357250 RECQL4O94761 1208 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 TRUB2O95900 331 aaKnown RBP11.93□□□□□ -0.5
COL9A1-202ENST00000357250 CDH8P55286 799 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 FMO1Q01740 532 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 DHRSXQ8N5I4 330 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 MAGEC3Q8TD91 643 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 ULBP1Q9BZM6 244 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 TKTL2Q9H0I9 626 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 XPNPEP3Q9NQH7 507 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 DERAQ9Y315 318 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 PDE2AO00408 941 aaPredicted RBP11.93□□□□□ -0.5
COL9A1-202ENST00000357250 KPNA5O15131 536 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 GUCY1B2O75343 617 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 ATP4AP20648 1035 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 PIK3R1P27986 724 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 TALDO1P37837 337 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 IL2P60568 153 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 NOMO3P69849 1222 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 TOP3AQ13472 1001 aaPredicted RBP11.93□□□□□ -0.5
COL9A1-202ENST00000357250 ARMC12Q5T9G4 340 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 CCDC103Q8IW40 242 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 BTN2A2Q8WVV5 523 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 CERS2Q96G23 380 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 CDHR5Q9HBB8 845 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 QSOX1O00391 747 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 RGS5O15539 181 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 PBX1P40424 430 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 DLG4P78352 724 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 BCL2L1Q07817 233 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 FAM187BQ17R55 369 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 TTMPQ5BVD1 217 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 LPCAT2Q7L5N7 544 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 CAMK1DQ8IU85 385 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 KAT2BQ92831 832 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 YME1L1Q96TA2 773 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 FAM126AQ9BYI3 521 aaPredicted RBP11.93□□□□□ -0.5
COL9A1-202ENST00000357250 PAPOLBQ9NRJ5 636 aaKnown RBP11.93□□□□□ -0.5
COL9A1-202ENST00000357250 PADI4Q9UM07 663 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 KLHL20Q9Y2M5 609 aa11.93□□□□□ -0.5
COL9A1-202ENST00000357250 TK2O00142 265 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 INPP4BO15327 924 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 PIGNO95427 931 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 BCL10O95999 233 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 ADRB2P07550 413 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 RPL9P32969 192 aaKnown RBP11.92□□□□□ -0.5
COL9A1-202ENST00000357250 IFNGR2P38484 337 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 ENPEPQ07075 957 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 ATAD3BQ5T9A4 648 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 EXOC3L1Q86VI1 746 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 UBE2E3Q969T4 207 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 MFSD14AQ96MC6 490 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 OLFM1Q99784 485 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 GEMIN8Q9NWZ8 242 aaKnown RBP11.92□□□□□ -0.5
COL9A1-202ENST00000357250 PNMA8BQ9ULN7 279 aaPredicted RBP11.92□□□□□ -0.5
COL9A1-202ENST00000357250 CASZ1Q86V15 1759 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 DCXO43602 365 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 RAG1P15918 1043 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 TPH1P17752 444 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 RPL22P35268 128 aaKnown RBP11.92□□□□□ -0.5
COL9A1-202ENST00000357250 ITGA1P56199 1179 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 INHBEP58166 350 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 SKP1P63208 163 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 ALDH6A1Q02252 535 aaKnown RBP11.92□□□□□ -0.5
COL9A1-202ENST00000357250 SKIV2LQ15477 1246 aaKnown RBP11.92□□□□□ -0.5
COL9A1-202ENST00000357250 INSCQ1MX18 579 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 PAGE2BQ5JRK9 111 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 PPP1R15BQ5SWA1 713 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 USP50Q70EL3 339 aaPredicted RBP11.92□□□□□ -0.5
COL9A1-202ENST00000357250 ATL1Q8WXF7 558 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 C2orf49Q9BVC5 232 aaPredicted RBP11.92□□□□□ -0.5
COL9A1-202ENST00000357250 CATSPERZQ9NTU4 200 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 ARHGAP28Q9P2N2 729 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 OPTCQ9UBM4 332 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 RPS6KB2Q9UBS0 482 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 AFDNP55196 1824 aaKnown RBP11.92□□□□□ -0.5
COL9A1-202ENST00000357250 hCG_1818297A0A087WSY0 165 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 A0A0B4J269 797 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 ALOX15BO15296 676 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 PSMG1O95456 288 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 MLYCDO95822 493 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 AKAP5P24588 427 aa11.92□□□□□ -0.5
COL9A1-202ENST00000357250 ACAT1P24752 427 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms