RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 POLR3KQ9Y2Y1 108 aaPredicted RBP7.29□□□□□ -1.24
VPS13A-201ENST00000355766 MSRB2Q9Y3D2 182 aa7.29□□□□□ -1.24
VPS13A-201ENST00000355766 R3HCC1Q9Y3T6 440 aaKnown RBP7.29□□□□□ -1.24
VPS13A-201ENST00000355766 INSL5Q9Y5Q6 135 aa7.29□□□□□ -1.24
VPS13A-201ENST00000355766 ANK1P16157 1881 aa7.29□□□□□ -1.24
VPS13A-201ENST00000355766 LAMA5O15230 3695 aa7.29□□□□□ -1.24
VPS13A-201ENST00000355766 DMXL2Q8TDJ6 3036 aa7.29□□□□□ -1.24
VPS13A-201ENST00000355766 IGSF10Q6WRI0 2623 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 BCLAF3A2AJT9 711 aaKnown RBP7.28□□□□□ -1.24
VPS13A-201ENST00000355766 TCAF2A6NFQ2 919 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 EFCAB8A8MWE9 144 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 PRRG1O14668 218 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 RTN2O75298 545 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 SLU7O95391 586 aaKnown RBP7.28□□□□□ -1.24
VPS13A-201ENST00000355766 HARSP12081 509 aaKnown RBP7.28□□□□□ -1.24
VPS13A-201ENST00000355766 TNFAIP3P21580 790 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 TKTP29401 623 aaKnown RBP7.28□□□□□ -1.24
VPS13A-201ENST00000355766 TNFSF9P41273 254 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 RBP5P82980 135 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 APBA1Q02410 837 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 CREB5Q02930 508 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 MYO1EQ12965 1108 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 PON2Q15165 354 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 STILQ15468 1287 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 ZBTB6Q15916 424 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 SLC10A6Q3KNW5 377 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 ZNF667Q5HYK9 610 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 CYP4A22Q5TCH4 519 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 C11orf63Q6NUN7 778 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 PKN3Q6P5Z2 889 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 GJB7Q6PEY0 223 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 ALKAL1Q6UXT8 129 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 ZNF572Q7Z3I7 529 aaPredicted RBP7.28□□□□□ -1.24
VPS13A-201ENST00000355766 CDR2LQ86X02 465 aaPredicted RBP7.28□□□□□ -1.24
VPS13A-201ENST00000355766 YAF2Q8IY57 180 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 EFCAB13Q8IY85 973 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 TCEAL8Q8IYN2 117 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 OXR1Q8N573 874 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 LEMD2Q8NC56 503 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 DEFB124Q8NES8 71 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 BEST2Q8NFU1 509 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 OR5B17Q8NGF7 314 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 CXorf38Q8TB03 319 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 E2F7Q96AV8 911 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 RSPRY1Q96DX4 576 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 ZNF560Q96MR9 790 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 TMEM74Q96NL1 305 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 MIS12Q9H081 205 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 TMEM9BQ9NQ34 198 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 KLHL3Q9UH77 587 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 KIAA1257Q9ULG3 409 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 UBQLN1Q9UMX0 589 aaKnown RBP7.28□□□□□ -1.24
VPS13A-201ENST00000355766 GUCA1BQ9UMX6 200 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 TDRD15B5MCY1 1934 aaKnown RBP7.28□□□□□ -1.24
VPS13A-201ENST00000355766 F5P12259 2224 aa7.28□□□□□ -1.24
VPS13A-201ENST00000355766 LAMA1P25391 3075 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 SHISA3A0PJX4 238 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 LACTBL1A8MY62 500 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 MIF4GDA9UHW6 222 aaKnown RBP7.27□□□□□ -1.25
VPS13A-201ENST00000355766 MED7O43513 233 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 DNAJA2O60884 412 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 RHOBTB1O94844 696 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 ABLIM3O94929 683 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 HTR3BO95264 441 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 CYP1A1P04798 512 aaPredicted RBP7.27□□□□□ -1.25
VPS13A-201ENST00000355766 THP07101 528 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 ATF2P15336 505 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 GJA1P17302 382 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 ELF1P32519 619 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 CDH5P33151 784 aaPredicted RBP7.27□□□□□ -1.25
VPS13A-201ENST00000355766 EPHA5P54756 1037 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 GSCP56915 257 aaPredicted RBP7.27□□□□□ -1.25
VPS13A-201ENST00000355766 TFAMQ00059 246 aaKnown RBP7.27□□□□□ -1.25
VPS13A-201ENST00000355766 FMO1Q01740 532 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 ARID5AQ03989 594 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 ARHGAP44Q17R89 818 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 SLFN11Q7Z7L1 901 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 UNC93AQ86WB7 457 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 PHF13Q86YI8 300 aaPredicted RBP7.27□□□□□ -1.25
VPS13A-201ENST00000355766 RELL1Q8IUW5 271 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 LILRA2Q8N149 483 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 ELMOD1Q8N336 334 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 SLC35F6Q8N357 371 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 LRRC57Q8N9N7 239 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 MSANTD4Q8NCY6 345 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 ZNF461Q8TAF7 563 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 CRELD1Q96HD1 420 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 SLITRK6Q9H5Y7 841 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 CYP4F11Q9HBI6 524 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 APOBEC3GQ9HC16 384 aaKnown RBP7.27□□□□□ -1.25
VPS13A-201ENST00000355766 ASAH2Q9NR71 780 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 EBF1Q9UH73 591 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 SIX4Q9UIU6 781 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 SLC8A2Q9UPR5 921 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 HYOU1Q9Y4L1 999 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 CEP83Q9Y592 693 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 SAR1BQ9Y6B6 198 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 DOCK6Q96HP0 2047 aa7.27□□□□□ -1.25
VPS13A-201ENST00000355766 PDCD11Q14690 1871 aaKnown RBP7.26□□□□□ -1.25
VPS13A-201ENST00000355766 MACROD2A1Z1Q3 448 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms