RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 AXIN2Q9Y2T1 843 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 TADA2AO75478 443 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 KDELR1P24390 212 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 SAMD3Q8N6K7 520 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 COMMD9Q9P000 198 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 ALOX15BO15296 676 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 TGDSO95455 350 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 SERPINA1P01009 418 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 SLC11A2P49281 568 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 OLR1P78380 273 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 PPIL2Q13356 520 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 CAMK2GQ13555 558 aaPredicted RBP12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 PIWIL4Q7Z3Z4 852 aaKnown RBP12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 TINF2Q9BSI4 451 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 OSBPL7Q9BZF2 842 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 CDHR5Q9HBB8 845 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 SPHKAPQ2M3C7 1700 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 TULP4Q9NRJ4 1543 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 CAPN8A6NHC0 703 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 PRR5-ARHGAP8B1AHC4 643 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 C19orf81C9J6K1 198 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 EPB42P16452 691 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 ACO1P21399 889 aaKnown RBP12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 TGFBR2P37173 567 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 CDK9P50750 372 aaKnown RBP12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 ARHGAP8P85298 464 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 ALFQ53S48 1182 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 ARHGAP36Q6ZRI8 547 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 TBC1D21Q8IYX1 336 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 TBCDQ9BTW9 1192 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 RBM22Q9NW64 420 aaKnown RBP eCLIP12.9□□□□□ -0.341e-6■■■□□ 15.8
SYNCRIP-201ENST00000355238 RPS6KB2Q9UBS0 482 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 GTF2A1LQ9UNN4 478 aa12.9□□□□□ -0.34
SYNCRIP-201ENST00000355238 SEZ6Q53EL9 994 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 DNAJC14Q6Y2X3 702 aaPredicted RBP12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 ILDR2Q71H61 639 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 POLNQ7Z5Q5 900 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 FITM2Q8N6M3 262 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 LEMD2Q8NC56 503 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 UBP1Q9NZI7 540 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 SH3BP4Q9P0V3 963 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 SLC12A4Q9UP95 1085 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 GNEQ9Y223 722 aaKnown RBP12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 LOC110117498-PIK3R3F6TDL0 507 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 TRAFD1O14545 582 aaPredicted RBP12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 FAM86B2P0C5J1 330 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 ZNF37AP17032 561 aaPredicted RBP12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 TPH1P17752 444 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 RBL1P28749 1068 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 GRIA4P48058 902 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 CCDC157Q569K6 752 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 INTS11Q5TA45 600 aaKnown RBP12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 NUDT18Q6ZVK8 323 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 C16orf62Q7Z3J2 963 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 CCDC36Q8IYA8 594 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 RASGEF1CQ8N431 466 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 MAB21L3Q8N8X9 362 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 TBL1YQ9BQ87 522 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 HGH1Q9BTY7 390 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 IL22Q9GZX6 179 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 DENND2DQ9H6A0 471 aaPredicted RBP12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 ARMC7Q9H6L4 198 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 AHSPQ9NZD4 102 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 F5H5T6 163 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 FSCN2O14926 492 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 LTA4HP09960 611 aaKnown RBP12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 ODC1P11926 461 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 PCNAP12004 261 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 GLRA2P23416 452 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 DSG3P32926 999 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 ADAM17P78536 824 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 THOC7Q6I9Y2 204 aaKnown RBP12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 ERAP2Q6P179 960 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 KCNT2Q6UVM3 1135 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 PAGE2Q7Z2X7 111 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 DDX53Q86TM3 631 aaKnown RBP12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 RAB43Q86YS6 212 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 PIK3C3Q8NEB9 887 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 TMEM109Q9BVC6 243 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 KATNAL1Q9BW62 490 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 RIOX1Q9H6W3 641 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 NT5MQ9NPB1 228 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 UBXN8O00124 270 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 MIPP30301 263 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 RAP1GAPP47736 663 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 HMGCS2P54868 508 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 STRIP1Q5VSL9 837 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 CRTC3Q6UUV7 619 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 TBC1D16Q8TBP0 767 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 EPS8L1Q8TE68 723 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 CITED4Q96RK1 184 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 CDH19Q9H159 772 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 CMTM6Q9NX76 183 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 PACSIN3Q9UKS6 424 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 PLA2G4CQ9UP65 541 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 COQ6Q9Y2Z9 468 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 FADS3Q9Y5Q0 445 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 SPACA6W5XKT8 324 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 CST1P01037 141 aa12.89□□□□□ -0.35
SYNCRIP-201ENST00000355238 PAEPP09466 180 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms