RNA–Protein interactions for RNA: ENST00000354361.3

SYF2-202, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2 BASIC

Gene SYF2, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-202ENST00000354361 TMEM117Q9H0C3 514 aa4.42□□□□□ -1.7
SYF2-202ENST00000354361 ABHD16BQ9H3Z7 469 aa4.42□□□□□ -1.7
SYF2-202ENST00000354361 TOR3AQ9H497 397 aa4.42□□□□□ -1.7
SYF2-202ENST00000354361 RPF1Q9H9Y2 349 aaKnown RBP4.42□□□□□ -1.7
SYF2-202ENST00000354361 SPC25Q9HBM1 224 aa4.42□□□□□ -1.7
SYF2-202ENST00000354361 PARVAQ9NVD7 372 aa4.42□□□□□ -1.7
SYF2-202ENST00000354361 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.42□□□□□ -1.7
SYF2-202ENST00000354361 WDR35Q9P2L0 1181 aa4.42□□□□□ -1.7
SYF2-202ENST00000354361 GTF3C4Q9UKN8 822 aa4.42□□□□□ -1.7
SYF2-202ENST00000354361 KIAA1257Q9ULG3 409 aa4.42□□□□□ -1.7
SYF2-202ENST00000354361 TTC7AQ9ULT0 858 aaPredicted RBP4.42□□□□□ -1.7
SYF2-202ENST00000354361 L1RE1Q9UN81 338 aa4.42□□□□□ -1.7
SYF2-202ENST00000354361 RIPK3Q9Y572 518 aa4.42□□□□□ -1.7
SYF2-202ENST00000354361 RBBP6Q7Z6E9 1792 aaKnown RBP4.42□□□□□ -1.7
SYF2-202ENST00000354361 ATAD5Q96QE3 1844 aa4.42□□□□□ -1.7
SYF2-202ENST00000354361 ZMYM2Q9UBW7 1377 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 A0A0B4J269 797 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 MANSC4A6NHS7 340 aaPredicted RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 LRRIQ3A6PVS8 624 aaPredicted RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 INO80B-WBP1J3KQ70 363 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 M0QZ92 97 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 FOXN3O00409 490 aaPredicted RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 ACKR2O00590 384 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 EPHB6O15197 1021 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 DNAJC8O75937 253 aaPredicted RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 MTA2O94776 668 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 HEXIM1O94992 359 aaKnown RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 SCAF4O95104 1147 aaKnown RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 LSM8O95777 96 aaKnown RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 GAS8O95995 478 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 CCNE2O96020 404 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 PRKCBP05771 671 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 PLEKP08567 350 aaPredicted RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 JMJD7P0C870 316 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 TRIM49P0CI25 452 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 TRIM49CP0CI26 452 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 CYP11B1P15538 503 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 ZSCAN20P17040 1043 aaPredicted RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 ABCB4P21439 1286 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 UBA1P22314 1058 aaKnown RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 PAX3P23760 479 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 HOXD13P35453 343 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 FLT3P36888 993 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 SLC8A3P57103 927 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 ADCY1Q08828 1119 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 MYO1EQ12965 1108 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 HLTFQ14527 1009 aaKnown RBP eCLIP4.41□□□□□ -1.7
SYF2-202ENST00000354361 SLMAPQ14BN4 828 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 FAM214AQ32MH5 1076 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 DCAF4L1Q3SXM0 396 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 ZACNQ401N2 412 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 TIGD2Q4W5G0 525 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 BEND6Q5SZJ8 279 aaPredicted RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 EFCAB12Q6NXP0 572 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 OLFML1Q6UWY5 402 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 FAM43BQ6ZT52 329 aaPredicted RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 SLFN11Q7Z7L1 901 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 RSPH3Q86UC2 560 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 ZNF410Q86VK4 478 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 HOOK3Q86VS8 718 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 PHYKPLQ8IUZ5 450 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 CCDC60Q8IWA6 550 aaPredicted RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 RHOT1Q8IXI2 618 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 FAM71AQ8IYT1 594 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 NME8Q8N427 588 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 RASGEF1CQ8N431 466 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 ANKRD13CQ8N6S4 541 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 TMEM35BQ8NCS4 154 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 IL31RAQ8NI17 732 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 PPTC7Q8NI37 304 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 SLC30A5Q8TAD4 765 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 COG1Q8WTW3 980 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 SHC3Q92529 594 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 CAVIN3Q969G5 261 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 EXOC4Q96A65 974 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 ZNF653Q96CK0 615 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 HES6Q96HZ4 224 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 RBM41Q96IZ5 413 aaKnown RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 MMS19Q96T76 1030 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 FERMT1Q9BQL6 677 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 CCDC77Q9BR77 488 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 CBWD1Q9BRT8 395 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 SYT17Q9BSW7 474 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 TLR10Q9BXR5 811 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 FGFBP2Q9BYJ0 223 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 FRMD8P1Q9BZ68 369 aaPredicted RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 POFUT1Q9H488 388 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 MTG2Q9H4K7 406 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 TAF1DQ9H5J8 278 aaPredicted RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 ASB7Q9H672 318 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 ANKZF1Q9H8Y5 726 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 SYNPO2LQ9H987 977 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 EPB41L5Q9HCM4 733 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 SIX2Q9NPC8 291 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 TOPORSQ9NS56 1045 aaPredicted RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 TMEM51Q9NW97 253 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 DDX56Q9NY93 547 aaKnown RBP4.41□□□□□ -1.7
SYF2-202ENST00000354361 PSD3Q9NYI0 1048 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 CALCOCO1Q9P1Z2 691 aa4.41□□□□□ -1.7
SYF2-202ENST00000354361 WRAP73Q9P2S5 460 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms