RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 MMRN2Q9H8L6 949 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 FZD3Q9NPG1 666 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 SARDHQ9UL12 918 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 ITIH6Q6UXX5 1313 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 USP9YO00507 2555 aaPredicted RBP16.34■□□□□ 0.21
DDX55-202ENST00000354291 KIF26BQ2KJY2 2108 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 CREBBPQ92793 2442 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 LZTS3O60299 673 aaPredicted RBP16.34■□□□□ 0.21
DDX55-202ENST00000354291 ITGB2P05107 769 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 KRT13P13646 458 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 TBX4P57082 545 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 CLDN2P57739 230 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 SRSF6Q13247 344 aaKnown RBP16.34■□□□□ 0.21
DDX55-202ENST00000354291 BECN1Q14457 450 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 TGIF1Q15583 401 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 FAM46CQ5VWP2 391 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 NUGGCQ68CJ6 796 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 CLEC14AQ86T13 490 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 SIX6OS1Q8N1H7 587 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 TMEM145Q8NBT3 493 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 CCDC150Q8NCX0 1101 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 NOX5Q96PH1 765 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 SPAG5Q96R06 1193 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 GOLPH3LQ9H4A5 285 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 MAPK8IP1Q9UQF2 711 aa16.34■□□□□ 0.21
DDX55-202ENST00000354291 NBPF19A0A087WUL8 3843 aa16.33■□□□□ 0.21
DDX55-202ENST00000354291 A0A1W2PQU0 124 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 LCP1P13796 627 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 ZNF18P17022 549 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 PSMC2P35998 433 aaKnown RBP16.33■□□□□ 0.2
DDX55-202ENST00000354291 RAD23BP54727 409 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 ADAM9Q13443 819 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 GOLGA7BQ2TAP0 167 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 ACCSLQ4AC99 568 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 DCAF6Q58WW2 860 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 AGBL4Q5VU57 503 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 ARHGAP17Q68EM7 881 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 DSG4Q86SJ6 1040 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 JAMLQ86YT9 394 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 TPCN2Q8NHX9 752 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 OR8D1Q8WZ84 308 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 FAM131CQ96AQ9 280 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 SYNDIG1Q9H7V2 258 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 CISHQ9NSE2 258 aa16.33■□□□□ 0.2
DDX55-202ENST00000354291 TEP1Q99973 2627 aaKnown RBP16.33■□□□□ 0.2
DDX55-202ENST00000354291 GOLGA6L4A6NEF3 574 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 XPO1O14980 1071 aaKnown RBP16.32■□□□□ 0.2
DDX55-202ENST00000354291 CASC3O15234 703 aaKnown RBP16.32■□□□□ 0.2
DDX55-202ENST00000354291 LUC7L3O95232 432 aaKnown RBP16.32■□□□□ 0.2
DDX55-202ENST00000354291 IGLV3-27P01718 113 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 TRIM49P0CI25 452 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 TRIM49CP0CI26 452 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 CR2P20023 1033 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 SLC5A2P31639 672 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 AKT2P31751 481 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 HNRNPKP61978 463 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX55-202ENST00000354291 ZCCHC8Q6NZY4 707 aaKnown RBP16.32■□□□□ 0.2
DDX55-202ENST00000354291 Q6ZSR6 202 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 FAM186BQ8IYM0 893 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 UBA3Q8TBC4 463 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 AZIN2Q96A70 460 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 SEMA3CQ99985 751 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 NUCKS1Q9H1E3 243 aaKnown RBP16.32■□□□□ 0.2
DDX55-202ENST00000354291 GDPD2Q9HCC8 539 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 PREBQ9HCU5 417 aa16.32■□□□□ 0.2
DDX55-202ENST00000354291 CCDC187A0A096LP49 1063 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 PIK3R2O00459 728 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 MUSKO15146 869 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 BNIP3LO60238 219 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 PPFIA2O75334 1257 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 ITGA2BP08514 1039 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 MLLT3P42568 568 aaPredicted RBP16.31■□□□□ 0.2
DDX55-202ENST00000354291 TAS2R38P59533 333 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 DRAP1Q14919 205 aaPredicted RBP16.31■□□□□ 0.2
DDX55-202ENST00000354291 TBR1Q16650 682 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 DEFB133Q30KQ1 61 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 EDRF1Q3B7T1 1238 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 MS4A13Q5J8X5 152 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 OR6B2Q6IFH4 312 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 C14orf80Q86SX3 495 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 PTRH1Q86Y79 214 aaKnown RBP16.31■□□□□ 0.2
DDX55-202ENST00000354291 SLC22A18ASQ8N1D0 253 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 RMND1Q9NWS8 449 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 NCKIPSDQ9NZQ3 722 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 HESX1Q9UBX0 185 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 TSPAN16Q9UKR8 245 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 PAXBP1Q9Y5B6 917 aa16.31■□□□□ 0.2
DDX55-202ENST00000354291 EME2A4GXA9 379 aaPredicted RBP16.3■□□□□ 0.2
DDX55-202ENST00000354291 C1QTNF3-AMACRE9PGA6 284 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 NOBOXO60393 691 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 TCEA3O75764 348 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 MOCS2O96007 188 aaPredicted RBP16.3■□□□□ 0.2
DDX55-202ENST00000354291 HNRNPA2B1P22626 353 aaKnown RBP16.3■□□□□ 0.2
DDX55-202ENST00000354291 GTF2H1P32780 548 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 DAOAP59103 153 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 MCCD1P59942 119 aaPredicted RBP16.3■□□□□ 0.2
DDX55-202ENST00000354291 NUCB2P80303 420 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 PPP3CAQ08209 521 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 NR0B2Q15466 257 aa16.3■□□□□ 0.2
DDX55-202ENST00000354291 IGFBP7Q16270 282 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms