RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ABCD1P33897 745 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 IGHMBP2P38935 993 aaKnown RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 ANXA11P50995 505 aaKnown RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 HSD17B4P51659 736 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 F2RL1P55085 397 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CXADRP78310 365 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FPGSQ05932 587 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 DLG2Q15700 870 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CDC37Q16543 378 aaPredicted RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 SLC18A3Q16572 532 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 ASTE1Q2TB18 679 aaPredicted RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 LEXMQ3ZCV2 418 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 OLFML2BQ68BL8 750 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 LAIR1Q6GTX8 287 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 DENND1BQ6P3S1 775 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 C17orf99Q6UX52 265 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 LURAP1LQ8IV03 231 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 SETD9Q8NE22 299 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 MDGA1Q8NFP4 955 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FAM136AQ96C01 138 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 RNF31Q96EP0 1072 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 PGAP3Q96FM1 320 aaPredicted RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 LOXL4Q96JB6 756 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FER1L6-AS2Q96M78 137 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 ADAM2Q99965 735 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 ADPGKQ9BRR6 497 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 FRMD8Q9BZ67 464 aaPredicted RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 PDCL3Q9H2J4 239 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 CDCP1Q9H5V8 836 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 ABCF3Q9NUQ8 709 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 UBE2J1Q9Y385 318 aaPredicted RBP1.75□□□□□ -2.13
BRCA1-202ENST00000354071 PAXBP1Q9Y5B6 917 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 ADGRF5Q8IZF2 1346 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 NCOA1Q15788 1441 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 LAMC1P11047 1609 aa1.75□□□□□ -2.13
BRCA1-202ENST00000354071 C19orf81C9J6K1 198 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TSPAN4O14817 238 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ADAMDEC1O15204 470 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GPR42O15529 346 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TULP3O75386 442 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 RPS6KA4O75676 772 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MTA2O94776 668 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 IGHDP01880 384 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SLC4A1P02730 911 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ALDOCP09972 364 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TAL1P17542 331 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 FLT1P17948 1338 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 PCSK6P29122 969 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 PPIFP30405 207 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 DIO1P49895 249 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MTHFSP49914 203 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SCNN1GP51170 649 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SUOXP51687 545 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 LBX1P52954 281 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TBL3Q12788 808 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 URB2Q14146 1524 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF628Q5EBL2 1059 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GARNL3Q5VVW2 1013 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ZMYM4Q5VZL5 1548 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ADALQ6DHV7 355 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TCTN3Q6NUS6 607 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 NCEH1Q6PIU2 408 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 USP51Q70EK9 711 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 FBN3Q75N90 2809 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF804AQ7Z570 1209 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 BRSK2Q8IWQ3 736 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 OR8H3Q8N146 312 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ZFAND2BQ8WV99 257 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SEPT1Q8WYJ6 367 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MMABQ96EY8 250 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 LCORQ96JN0 433 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GAD1Q99259 594 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 PCED1AQ9H1Q7 454 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 FBXL17Q9UF56 701 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 NEURL4Q96JN8 1562 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ARHGAP10A1A4S6 786 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 PRYO14603 147 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SEPT4O43236 478 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SUV39H1O43463 412 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SCAF4O95104 1147 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 EIF2S1P05198 315 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ATP5BP06576 529 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 EPHA3P29320 983 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SLC15A1P46059 708 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 NRIP1P48552 1158 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 PMS2P54278 862 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ADARP55265 1226 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GRIK3Q13003 919 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GXYLT1Q4G148 440 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MPP7Q5T2T1 576 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ERMARDQ5T6L9 678 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GPR139Q6DWJ6 353 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 NAA16Q6N069 864 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ACSM6Q6P461 480 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM81Q6P7N7 255 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 FBXO46Q6PJ61 603 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SLFN11Q7Z7L1 901 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TTC30AQ86WT1 665 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 DHX40Q8IX18 779 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF808Q8N4W9 903 aaPredicted RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms