RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 MYLK4Q86YV6 388 aaPredicted RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 NUDCD3Q8IVD9 361 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 PYROXD2Q8N2H3 581 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 GALNT15Q8N3T1 639 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 CCDC185Q8N715 623 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 SHKBP1Q8TBC3 707 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 ZNF689Q96CS4 500 aaPredicted RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 MCOLN1Q9GZU1 580 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 WWP1Q9H0M0 922 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 ZCWPW1Q9H0M4 648 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 PCMTD2Q9NV79 361 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 PAK5Q9P286 719 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 TAGLN3Q9UI15 199 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 KIAA0355O15063 1070 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 SNNO75324 88 aaPredicted RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 GSTA2P09210 222 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 UBTFL6P0CB48 400 aaPredicted RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 CCNFP41002 786 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 WDR5P61964 334 aaKnown RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 USP46P62068 366 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 SARNPP82979 210 aaKnown RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 ROR2Q01974 943 aaKnown RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 CBLBQ13191 982 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 UBAP2LQ14157 1087 aaKnown RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 ACAP1Q15027 740 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 ZRSR2Q15696 482 aaKnown RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 DCAF6Q58WW2 860 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 CWF19L1Q69YN2 538 aaKnown RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 TRMT10BQ6PF06 316 aaKnown RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 IZUMO2Q6UXV1 221 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 BNIPLQ7Z465 357 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 SLC25A41Q8N5S1 370 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 PLD5Q8N7P1 536 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 EDEM1Q92611 657 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 NT5C3BQ969T7 300 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 FAM149B1Q96BN6 582 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 SMARCD1Q96GM5 515 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 RNF157Q96PX1 679 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 LRRC4Q9HBW1 653 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 ASNSD1Q9NWL6 643 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 MTMR10Q9NXD2 777 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 ABI2Q9NYB9 513 aaPredicted RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 CXXC1Q9P0U4 656 aaPredicted RBP8.8□□□□□ -1
TRIM55-204ENST00000353317 SLC27A5Q9Y2P5 690 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 HEY1Q9Y5J3 304 aa8.8□□□□□ -1
TRIM55-204ENST00000353317 MYO18AQ92614 2054 aaKnown RBP8.79□□□□□ -1
TRIM55-204ENST00000353317 SYNJ2BP-COX16A0A087WUM0 186 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 SPECC1L-ADORA2AF8WAN1 911 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 TRDMT1O14717 391 aaKnown RBP8.79□□□□□ -1
TRIM55-204ENST00000353317 APOEP02649 317 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 ZCCHC18P0CG32 403 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 SDC4P31431 198 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 MATKP42679 507 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 ACADSBP45954 432 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 ARPP19P56211 112 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 IFRD2Q12894 506 aaPredicted RBP8.79□□□□□ -1
TRIM55-204ENST00000353317 TRMT5Q32P41 509 aaKnown RBP8.79□□□□□ -1
TRIM55-204ENST00000353317 LGSNQ5TDP6 509 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 MROH9Q5TGP6 573 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 RNF19BQ6ZMZ0 732 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 UNC5AQ6ZN44 842 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 CRLF3Q8IUI8 442 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 TRIM42Q8IWZ5 723 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 NDUFAF2Q8N183 169 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.79□□□□□ -1
TRIM55-204ENST00000353317 RILPQ96NA2 401 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 TTC1Q99614 292 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 SNRNP25Q9BV90 132 aaKnown RBP8.79□□□□□ -1
TRIM55-204ENST00000353317 ETNK2Q9NVF9 386 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 OSER1Q9NX31 292 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 COX16Q9P0S2 106 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 NUDT5Q9UKK9 219 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 ANGPTL2Q9UKU9 493 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 DSEQ9UL01 958 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 PPM1HQ9ULR3 514 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 HBS1LQ9Y450 684 aaKnown RBP8.79□□□□□ -1
TRIM55-204ENST00000353317 MFHAS1Q9Y4C4 1052 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 MEI4A8MW99 385 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 USP1O94782 785 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 BPGMP07738 259 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 LYNP07948 512 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 SERPINA6P08185 405 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 RAG1P15918 1043 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 PTPN9P43378 593 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 TFDP2Q14188 446 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 GSTA3Q16772 222 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 CTXN3Q4LDR2 81 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 C1orf146Q5VVC0 180 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 FAM131BQ86XD5 332 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 ZDHHC17Q8IUH5 632 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 RNF168Q8IYW5 571 aaPredicted RBP8.79□□□□□ -1
TRIM55-204ENST00000353317 THEM5Q8N1Q8 247 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 MPP5Q8N3R9 675 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 PQLC3Q8N755 202 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 NETO2Q8NC67 525 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 RTP4Q96DX8 246 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 SLC2A13Q96QE2 648 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 NPY6RQ99463 290 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 NMUR1Q9HB89 426 aa8.79□□□□□ -1
TRIM55-204ENST00000353317 PIGVQ9NUD9 493 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms