RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 POLR3BQ9NW08 1133 aaPredicted RBP14.27□□□□□ -0.12
SEC13-202ENST00000350697 HPCAL4Q9UM19 191 aa14.27□□□□□ -0.12
SEC13-202ENST00000350697 CXorf51AA0A1B0GTR3 108 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 ZNF487B1APH4 448 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 RASA4BC9J798 803 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 K7ESF4 209 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 CBX4O00257 560 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 DCLK1O15075 740 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 RASA4O43374 803 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 SNAP91O60641 907 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 PALMO75781 387 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 ZMPSTE24O75844 475 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 EPHX1P07099 455 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 PRKCHP24723 683 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 SERPINB6P35237 376 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 ACVRL1P37023 503 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 STK19P49842 368 aaPredicted RBP14.26□□□□□ -0.13
SEC13-202ENST00000350697 SLC20A2Q08357 652 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 MMRN1Q13201 1228 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 ANKRD20A8PQ5CZ79 823 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 RETSATQ6NUM9 610 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 TMEM92Q6UXU6 159 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 KATNAL2Q8IYT4 538 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 TSTD1Q8NFU3 115 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 FAF2Q96CS3 445 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 KLC2Q9H0B6 622 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 LRRC19Q9H756 370 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 LZTFL1Q9NQ48 299 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 ETNK2Q9NVF9 386 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 SUN2Q9UH99 717 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 SLCO3A1Q9UIG8 710 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 HS3ST2Q9Y278 367 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.26□□□□□ -0.131e-11■□□□□ 8.3
SEC13-202ENST00000350697 CAPN6Q9Y6Q1 641 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 CKAP5Q14008 2032 aa14.26□□□□□ -0.13
SEC13-202ENST00000350697 MUC6Q6W4X9 2439 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 A0A1W2PQF6 199 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 ARHGAP42A6NI28 874 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 C3orf70A6NLC5 250 aaPredicted RBP14.25□□□□□ -0.13
SEC13-202ENST00000350697 KDELR3O43731 214 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 SYNCRIPO60506 623 aaKnown RBP14.25□□□□□ -0.13
SEC13-202ENST00000350697 APBB3O95704 486 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 HLA-EP13747 358 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 GLDCP23378 1020 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 HOXA6P31267 233 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 CTNNA1P35221 906 aaKnown RBP14.25□□□□□ -0.13
SEC13-202ENST00000350697 CSTF1Q05048 431 aaKnown RBP14.25□□□□□ -0.13
SEC13-202ENST00000350697 SERINC3Q13530 473 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 ZNF528Q3MIS6 628 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 AFMIDQ63HM1 303 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 PEX26Q7Z412 305 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 NT5DC3Q86UY8 548 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 ZNF354CQ86Y25 554 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 NPWQ8N729 165 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 PCDH19Q8TAB3 1148 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 HMCESQ96FZ2 354 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 CELF6Q96J87 481 aaKnown RBP14.25□□□□□ -0.13
SEC13-202ENST00000350697 HHIPQ96QV1 700 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 SLC39A8Q9C0K1 460 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 KCNH6Q9H252 994 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 AMFRQ9UKV5 643 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 MFHAS1Q9Y4C4 1052 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 ARIH1Q9Y4X5 557 aaPredicted RBP14.25□□□□□ -0.13
SEC13-202ENST00000350697 PCDHA3Q9Y5H8 950 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 RAD54BQ9Y620 910 aa14.25□□□□□ -0.13
SEC13-202ENST00000350697 CCDC66A2RUB6 948 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 ZSCAN5CA6NGD5 496 aaPredicted RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 TTC34A8MYJ7 566 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 ZBTB24O43167 697 aaPredicted RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 ATP9BO43861 1147 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 ALDH1A2O94788 518 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 ZRANB2O95218 330 aaKnown RBP eCLIP14.24□□□□□ -0.13
SEC13-202ENST00000350697 SRCP12931 536 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 TDGF1P13385 188 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 CTNNA2P26232 953 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 MARCKSL1P49006 195 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 CLCN6P51797 869 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 GEMIN4P57678 1058 aaKnown RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 ARF5P84085 180 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 CAMK2GQ13555 558 aaPredicted RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 HNRNPA1L2Q32P51 320 aaKnown RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 KIAA1211LQ6NV74 962 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 TSSK4Q6SA08 328 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 ARHGAP12Q8IWW6 846 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 RCOR2Q8IZ40 523 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 SH2D3CQ8N5H7 860 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 ZNF366Q8N895 744 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 ATP11CQ8NB49 1132 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 EXD1Q8NHP7 514 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 UBE2Q2Q8WVN8 375 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 KRT35Q92764 455 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 RNF25Q96BH1 459 aaPredicted RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 RBM41Q96IZ5 413 aaKnown RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 RNF157Q96PX1 679 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 MAK16Q9BXY0 300 aaKnown RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 FAM126AQ9BYI3 521 aaPredicted RBP14.24□□□□□ -0.13
SEC13-202ENST00000350697 PRDM16Q9HAZ2 1276 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 CD248Q9HCU0 757 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 EDDM13A0A1B0GTR0 161 aa14.24□□□□□ -0.13
SEC13-202ENST00000350697 TCRBV21S2A2A0A5A6 115 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms