RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 IGSF9Q9P2J2 1179 aa17.5■□□□□ 0.39
SMARCC2-202ENST00000347471 SLC39A10Q9ULF5 831 aa17.5■□□□□ 0.39
SMARCC2-202ENST00000347471 GJB3O75712 270 aa17.5■□□□□ 0.39
SMARCC2-202ENST00000347471 CD86P42081 329 aa17.5■□□□□ 0.39
SMARCC2-202ENST00000347471 SERPINB4P48594 390 aa17.5■□□□□ 0.39
SMARCC2-202ENST00000347471 RPS24P62847 133 aaKnown RBP17.5■□□□□ 0.39
SMARCC2-202ENST00000347471 NAPEPLDQ6IQ20 393 aa17.5■□□□□ 0.39
SMARCC2-202ENST00000347471 BNIPLQ7Z465 357 aa17.5■□□□□ 0.39
SMARCC2-202ENST00000347471 C8orf48Q96LL4 319 aa17.5■□□□□ 0.39
SMARCC2-202ENST00000347471 OSBPL2Q9H1P3 480 aa17.5■□□□□ 0.39
SMARCC2-202ENST00000347471 MTSS1O43312 755 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 ACVRL1P37023 503 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 PACS1Q6VY07 963 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 ARHGAP12Q8IWW6 846 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 SPATA6LQ8N4H0 392 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 ERP27Q96DN0 273 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 CYP2S1Q96SQ9 504 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 TSSK1BQ9BXA7 367 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 ZYG11BQ9C0D3 744 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 PPCSQ9HAB8 311 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 SHROOM3Q8TF72 1996 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 TDRD15B5MCY1 1934 aaKnown RBP17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 GOLGA8CPA6NN73 597 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 SLC38A8A6NNN8 435 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 PITPNM1O00562 1244 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 RAMP2O60895 175 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 GLRBP48167 497 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 MGAT5Q09328 741 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 CTBP1Q13363 440 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 SETDB1Q15047 1291 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 RTL3Q8N8U3 475 aaKnown RBP17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 HAPLN3Q96S86 360 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.49■□□□□ 0.395e-7■□□□□ 8.3
SMARCC2-202ENST00000347471 HAUS2Q9NVX0 235 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 TRHDEQ9UKU6 1024 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 ARL2BPQ9Y2Y0 163 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 PRPF4O43172 522 aaKnown RBP eCLIP17.49■□□□□ 0.394e-10■■■■■ 38.9
SMARCC2-202ENST00000347471 ATF6P18850 670 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 ALDH1A3P47895 512 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 CDK16Q00536 496 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 DSC2Q02487 901 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 POLD3Q15054 466 aaPredicted RBP17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 PDK4Q16654 411 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 OTOAQ7RTW8 1153 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 SPATS2Q86XZ4 545 aaKnown RBP17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 ARHGAP18Q8N392 663 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 OR6P1Q8NGX9 317 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 ZSCAN18Q8TBC5 510 aaPredicted RBP17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 ARHGEF38Q9NXL2 777 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 TLR6Q9Y2C9 796 aa17.49■□□□□ 0.39
SMARCC2-202ENST00000347471 DNAJC6O75061 913 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 RTN3O95197 1032 aaPredicted RBP17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 SLC2A3P11169 496 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 CDH17Q12864 832 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 MARC1Q5VT66 337 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 KCNMB4Q86W47 210 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 TNS4Q8IZW8 715 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 ATP2A3Q93084 1043 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 MYEOVQ96EZ4 313 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 BRD8Q9H0E9 1235 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 GLOD4Q9HC38 313 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 BNIP3LO60238 219 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 PRKCGP05129 697 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 TROVE2P10155 538 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 FGFR3P22607 806 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 HCAR3P49019 387 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 CNGA3Q16281 694 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 ANKRD20A4Q4UJ75 823 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 PIGWQ7Z7B1 504 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 OR7D4Q8NG98 312 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 DENND1AQ8TEH3 1009 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 ALKBH8Q96BT7 664 aaKnown RBP17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 ZNF419Q96HQ0 510 aaPredicted RBP17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 TRIM33Q9UPN9 1127 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 F5H5T6 163 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 PHGDHO43175 533 aaKnown RBP17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 MAFKO60675 156 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 ATP5C1P36542 298 aaKnown RBP17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 HARS2P49590 506 aaKnown RBP17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 ZNF235Q14590 738 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 GPATCH11Q8N954 259 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 TBL1YQ9BQ87 522 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 SLC2A6Q9UGQ3 507 aa17.48■□□□□ 0.39
SMARCC2-202ENST00000347471 FGF10O15520 208 aaPredicted RBP17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 ITGA2BP08514 1039 aa17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 N4BP2L1Q5TBK1 243 aaPredicted RBP17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 SCYL1Q96KG9 808 aa17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 TMEM189-UBE2V1I3L0A0 370 aa17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 PRKCHP24723 683 aa17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 SCTRP47872 440 aa17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 A0A0D9SEW6 157 aa17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 ALDH3A1P30838 453 aa17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 CGB2Q6NT52 195 aa17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 ESRP1Q6NXG1 681 aaKnown RBP17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 LDB1Q86U70 411 aaPredicted RBP17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 PPM1EQ8WY54 764 aa17.47■□□□□ 0.39
SMARCC2-202ENST00000347471 FAM159BA6NKW6 160 aa17.46■□□□□ 0.39
SMARCC2-202ENST00000347471 CBX4O00257 560 aa17.46■□□□□ 0.39
SMARCC2-202ENST00000347471 SEC24AO95486 1093 aa17.46■□□□□ 0.39
SMARCC2-202ENST00000347471 GJA1P17302 382 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms