RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CHST9Q7L1S5 443 aa21.92■■□□□ 1.1
TSPAN3-202ENST00000346495 IGDCC3Q8IVU1 814 aa21.92■■□□□ 1.1
TSPAN3-202ENST00000346495 TLCD1Q96CP7 247 aa21.92■■□□□ 1.1
TSPAN3-202ENST00000346495 PRICKLE1Q96MT3 831 aaPredicted RBP21.92■■□□□ 1.1
TSPAN3-202ENST00000346495 GORASP1Q9BQQ3 440 aa21.92■■□□□ 1.1
TSPAN3-202ENST00000346495 ADAM21Q9UKJ8 722 aa21.92■■□□□ 1.1
TSPAN3-202ENST00000346495 EXOC1LA0A1B0GW35 172 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 A0A1W2PRU2 124 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 GSTA2P09210 222 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 GRIA1P42261 906 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 MMP13P45452 471 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 IFNAR2P48551 515 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 RENBPP51606 427 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 IL10RBQ08334 325 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 HNRNPDQ14103 355 aaKnown RBP21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 KCTD11Q693B1 232 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 ZNF354CQ86Y25 554 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 KLHDC8BQ8IXV7 354 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 AGGF1Q8N302 714 aaeCLIP21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 RIBC1Q8N443 379 aaPredicted RBP21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 MAB21L3Q8N8X9 362 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 ADAMTS19Q8TE59 1207 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 NSMCE1Q8WV22 266 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 SIGLEC10Q96LC7 697 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 FCRL5Q96RD9 977 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 GLOD4Q9HC38 313 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 RBM22Q9NW64 420 aaKnown RBP eCLIP21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 LSM7Q9UK45 103 aaKnown RBP21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 AAR2Q9Y312 384 aaKnown RBP21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 H3BNC9 293 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 CDH16O75309 829 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 CKMP06732 381 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 HNRNPA1P09651 372 aaKnown RBP eCLIP21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 PTPN2P17706 415 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 ATP5DP30049 168 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 EPHA5P54756 1037 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 SERINC3Q13530 473 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 SKIDA1Q1XH10 827 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 MLPHQ9BV36 600 aaPredicted RBP21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 MAGEH1Q9H213 219 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 FETUBQ9UGM5 382 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 ZC3H7BQ9UGR2 993 aaKnown RBP21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 DPP7Q9UHL4 492 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 RABGEF1Q9UJ41 708 aa21.91■■□□□ 1.1
TSPAN3-202ENST00000346495 A0A1B0GVM2 712 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 TCAF2A6NFQ2 919 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 ANXA9O76027 345 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 PEX11BO96011 259 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 NR1D1P20393 614 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 MAGOHP61326 146 aaKnown RBP21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 RPS24P62847 133 aaKnown RBP21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 GABPB1Q06547 395 aaPredicted RBP21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 KLHL38Q2WGJ6 581 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 TNFAIP8L3Q5GJ75 292 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 Q6ZNB5 142 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 TDRPQ86YL5 185 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 FBF1Q8TES7 1133 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 EBNA1BP2Q99848 306 aaKnown RBP21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 ACSS3Q9H6R3 686 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 LRRC40Q9H9A6 602 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 LGALS13Q9UHV8 139 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 ZNF510Q9Y2H8 683 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 CHD5Q8TDI0 1954 aa21.9■■□□□ 1.1
TSPAN3-202ENST00000346495 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 SDR42E2A6NKP2 422 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 J3KR12 359 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 TRDMT1O14717 391 aaKnown RBP21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 GREM1O60565 184 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 HLA-DQB2P05538 268 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 EPCAMP16422 314 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 DDX6P26196 483 aaKnown RBP eCLIP21.89■■□□□ 1.092e-10■■□□□ 13.4
TSPAN3-202ENST00000346495 GNA12Q03113 381 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 ZNF177Q13360 481 aaPredicted RBP21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 EMC10Q5UCC4 262 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 MARC1Q5VT66 337 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 KDM7AQ6ZMT4 941 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 OTOP3Q7RTS5 596 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 ARFGAP2Q8N6H7 521 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 LEMD2Q8NC56 503 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 ARHGEF2Q92974 986 aaKnown RBP21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 CFAP36Q96G28 342 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 SLC24A2Q9UI40 661 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 MAD1L1Q9Y6D9 718 aa21.89■■□□□ 1.09
TSPAN3-202ENST00000346495 HELZP42694 1942 aaKnown RBP21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 AP3B1O00203 1094 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 TSPAN3O60637 253 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 XYLBO75191 536 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 RFPL2O75678 378 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 STX2P32856 288 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 ACVRL1P37023 503 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 GEMP55040 296 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 ZXDBP98169 803 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 SPARCL1Q14515 664 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 NAPEPLDQ6IQ20 393 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 ELMSAN1Q6PJG2 1045 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 SETD3Q86TU7 594 aaPredicted RBP21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 CCNJLQ8IV13 435 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 FAM217AQ8IXS0 508 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 TEX26Q8N6G2 289 aa21.88■■□□□ 1.09
TSPAN3-202ENST00000346495 STAMBPL1Q96FJ0 436 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms