RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 CLPTM1LQ96KA5 538 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 VAT1Q99536 393 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 MMADHCQ9H3L0 296 aaPredicted RBP15.74■□□□□ 0.11
UPF3B-202ENST00000345865 IARS2Q9NSE4 1012 aaKnown RBP15.74■□□□□ 0.11
UPF3B-202ENST00000345865 ARHGEF38Q9NXL2 777 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 TAGLN3Q9UI15 199 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 NUDT5Q9UKK9 219 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 ADAM28Q9UKQ2 775 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 SOX13Q9UN79 622 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 A0A096LPK6 155 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 G3V2L1 256 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 DFFAO00273 331 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 IRAK2O43187 625 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 CACNG3O60359 315 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 C2P06681 752 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 CPA3P15088 417 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 NPY2RP49146 381 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 LPIN1Q14693 890 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 MOCOSQ96EN8 888 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 ADAM2Q99965 735 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 IL22Q9GZX6 179 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 LRRC42Q9Y546 428 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 MYLKQ15746 1914 aa15.74■□□□□ 0.11
UPF3B-202ENST00000345865 PATJQ8NI35 1801 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.73■□□□□ 0.11
UPF3B-202ENST00000345865 B4GALT3O60512 393 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 MYCNP04198 464 aaPredicted RBP15.73■□□□□ 0.11
UPF3B-202ENST00000345865 HARS2P49590 506 aaKnown RBP15.73■□□□□ 0.11
UPF3B-202ENST00000345865 IDH3AP50213 366 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 ABCE1P61221 599 aaKnown RBP15.73■□□□□ 0.11
UPF3B-202ENST00000345865 MPP3Q13368 585 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 ITGA7Q13683 1181 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 OVOS1Q6IE37 1185 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 METTL23Q86XA0 190 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 KLHDC8BQ8IXV7 354 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 SCML4Q8N228 414 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 SHKBP1Q8TBC3 707 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 URGCPQ8TCY9 931 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 CASP10Q92851 521 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 UPF3AQ9H1J1 476 aaKnown RBP15.73■□□□□ 0.11
UPF3B-202ENST00000345865 NYNRINQ9P2P1 1898 aaKnown RBP15.73■□□□□ 0.11
UPF3B-202ENST00000345865 TNFRSF10BO14763 440 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 ADAMTS4O75173 837 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 PAGE1O75459 146 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 ASGR1P07306 291 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 OR4Q2P0C623 313 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 GRK2P25098 689 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 GABRB3P28472 473 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 CSRP3P50461 194 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 RAP1GDS1P52306 607 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 ZNF135P52742 658 aaPredicted RBP15.73■□□□□ 0.11
UPF3B-202ENST00000345865 CDH17Q12864 832 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 RCN1Q15293 331 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 SCD5Q86SK9 330 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 VPS39Q96JC1 886 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 TSGA13Q96PP4 275 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 CXorf56Q9H5V9 222 aa15.73■□□□□ 0.11
UPF3B-202ENST00000345865 MAGEB16A2A368 324 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 MAFKO60675 156 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 ZNF189O75820 626 aaPredicted RBP15.72■□□□□ 0.11
UPF3B-202ENST00000345865 AOC1P19801 751 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 SLC5A3P53794 718 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 CLNS1AP54105 237 aaKnown RBP15.72■□□□□ 0.11
UPF3B-202ENST00000345865 TUSC3Q13454 348 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 GRM3Q14832 879 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 TAF11Q15544 211 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 CCDC153Q494R4 210 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 MANEALQ5VSG8 457 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.72■□□□□ 0.11
UPF3B-202ENST00000345865 NRG4Q8WWG1 115 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 FAM161BQ96MY7 647 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 KIFC1Q9BW19 673 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 SLC39A8Q9C0K1 460 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 ACSS2Q9NR19 701 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 FNDC1Q4ZHG4 1894 aaPredicted RBP15.72■□□□□ 0.11
UPF3B-202ENST00000345865 MEI4A8MW99 385 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 SPECC1L-ADORA2AF8WAN1 911 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 MAGEC1O60732 1142 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 TBX10O75333 385 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 ALOX15P16050 662 aaPredicted RBP15.72■□□□□ 0.11
UPF3B-202ENST00000345865 CPOXP36551 454 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 SESN3P58005 492 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 USP4Q13107 963 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 PPP2R5DQ14738 602 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 NAPEPLDQ6IQ20 393 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 DENND5AQ6IQ26 1287 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 TMEM151AQ8N4L1 468 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 MAB21L3Q8N8X9 362 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 NAF1Q96HR8 494 aaKnown RBP15.72■□□□□ 0.11
UPF3B-202ENST00000345865 FCRL2Q96LA5 508 aaPredicted RBP15.72■□□□□ 0.11
UPF3B-202ENST00000345865 SIKE1Q9BRV8 207 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 NMUR1Q9HB89 426 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 ZFYVE28Q9HCC9 887 aa15.72■□□□□ 0.11
UPF3B-202ENST00000345865 SIN3BO75182 1162 aa15.71■□□□□ 0.11
UPF3B-202ENST00000345865 PSMG1O95456 288 aa15.71■□□□□ 0.11
UPF3B-202ENST00000345865 LMNAP02545 664 aaKnown RBP15.71■□□□□ 0.11
UPF3B-202ENST00000345865 ATP5BP06576 529 aaKnown RBP15.71■□□□□ 0.11
UPF3B-202ENST00000345865 CCNCP24863 283 aa15.71■□□□□ 0.11
UPF3B-202ENST00000345865 GRIK3Q13003 919 aa15.71■□□□□ 0.11
UPF3B-202ENST00000345865 THOC5Q13769 683 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms