RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PIGVQ9NUD9 493 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 SERGEFQ9UGK8 458 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 PAXBP1Q9Y5B6 917 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 TMEM131Q92545 1883 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 A0A087WV48 116 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 F8VZ95 297 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 H0Y8X5 98 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 KCNK3O14649 394 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
SGCA-202ENST00000344627 ALOX15BO15296 676 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 RNGTTO60942 597 aaKnown RBP12.75□□□□□ -0.37
SGCA-202ENST00000344627 CLDN11O75508 207 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 CNTN5O94779 1100 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 LSM8O95777 96 aaKnown RBP12.75□□□□□ -0.37
SGCA-202ENST00000344627 ITGAVP06756 1048 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 RHOCP08134 193 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 ATXN1LP0C7T5 689 aaKnown RBP12.75□□□□□ -0.37
SGCA-202ENST00000344627 CDH5P33151 784 aaPredicted RBP12.75□□□□□ -0.37
SGCA-202ENST00000344627 GABRB2P47870 512 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 RXRGP48443 463 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 KLK7P49862 253 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 IRAK1P51617 712 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 POM121L1PQ3SYA9 428 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 BRMS1LQ5PSV4 323 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 CXorf57Q6NSI4 855 aaKnown RBP12.75□□□□□ -0.37
SGCA-202ENST00000344627 LAYNQ6UX15 382 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.75□□□□□ -0.37
SGCA-202ENST00000344627 PRPF39Q86UA1 669 aaKnown RBP12.75□□□□□ -0.37
SGCA-202ENST00000344627 MFSD2AQ8NA29 543 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 FAM174AQ8TBP5 190 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 PTPRN2Q92932 1015 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 FAM131CQ96AQ9 280 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 NPY6RQ99463 290 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 FEM1AQ9BSK4 669 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 NAA15Q9BXJ9 866 aaKnown RBP12.75□□□□□ -0.37
SGCA-202ENST00000344627 AASDHPPTQ9NRN7 309 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 ANO10Q9NW15 660 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 FANCLQ9NW38 375 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 NYNRINQ9P2P1 1898 aaKnown RBP12.75□□□□□ -0.37
SGCA-202ENST00000344627 SLCO1B1Q9Y6L6 691 aa12.75□□□□□ -0.37
SGCA-202ENST00000344627 IGF2RP11717 2491 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 TBC1D3DA0A087WVF3 549 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 TBC1D3IA0A087WXS9 549 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 TBC1D3EA0A087X179 549 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 TBC1D3KA0A087X1G2 549 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 TBC1D3FA6NER0 549 aaPredicted RBP12.74□□□□□ -0.37
SGCA-202ENST00000344627 GOLGA8CPA6NN73 597 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 TBC1D3LB9A6J9 549 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 LATO43561 262 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 SRGAP2O75044 1071 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 LDOC1O95751 146 aaPredicted RBP12.74□□□□□ -0.37
SGCA-202ENST00000344627 TBC1D3HP0C7X1 549 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 CXCR3P49682 368 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 CDH4P55283 916 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 KRT83P78385 493 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 COL9A2Q14055 689 aaPredicted RBP12.74□□□□□ -0.37
SGCA-202ENST00000344627 DLG2Q15700 870 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 SLC25A52Q3SY17 297 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 C6orf118Q5T5N4 469 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 TBC1D3GQ6DHY5 549 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 TBC1D3CQ6IPX1 549 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 NEK5Q6P3R8 708 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 CLEC17AQ6ZS10 378 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 TFAP2DQ7Z6R9 452 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 PDZD3Q86UT5 571 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 TBC1D3Q8IZP1 549 aaPredicted RBP12.74□□□□□ -0.37
SGCA-202ENST00000344627 AADATQ8N5Z0 425 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 ATP11CQ8NB49 1132 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 EPS8L1Q8TE68 723 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 SLC20A1Q8WUM9 679 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 OR8D1Q8WZ84 308 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 NXPE2Q96DL1 559 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 CFAP57Q96MR6 1250 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 METTL5Q9NRN9 209 aaKnown RBP12.74□□□□□ -0.37
SGCA-202ENST00000344627 TMPRSS4Q9NRS4 437 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 SEPT11Q9NVA2 429 aaKnown RBP12.74□□□□□ -0.37
SGCA-202ENST00000344627 ARHGEF38Q9NXL2 777 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 FARP1Q9Y4F1 1045 aaPredicted RBP12.74□□□□□ -0.37
SGCA-202ENST00000344627 PLXNA2O75051 1894 aa12.74□□□□□ -0.37
SGCA-202ENST00000344627 FREM2Q5SZK8 3169 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 DMXL2Q8TDJ6 3036 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 TP53BP1Q12888 1972 aaPredicted RBP12.73□□□□□ -0.37
SGCA-202ENST00000344627 TRABD2BA6NFA1 517 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 C1QTNF3-AMACRE9PGA6 284 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 PLK4O00444 970 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 ENC1O14682 589 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 RFPL3O75679 317 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 SOX5P35711 763 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 FLT3P36888 993 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 SCNN1AP37088 669 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 STAT1P42224 750 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 NOMO3P69849 1222 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 ATP11AP98196 1134 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 IL9RQ01113 521 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 CAMK2BQ13554 666 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 SYCP1Q15431 976 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 CDO1Q16878 200 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 ALFQ53S48 1182 aa12.73□□□□□ -0.37
SGCA-202ENST00000344627 OTUD1Q5VV17 481 aaPredicted RBP12.73□□□□□ -0.37
SGCA-202ENST00000344627 CDKAL1Q5VV42 579 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms