RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 IL22Q9GZX6 179 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 XPNPEP1Q9NQW7 623 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 RBM22Q9NW64 420 aaKnown RBP eCLIP11.07□□□□□ -0.64
RPL28-201ENST00000344063 CD274Q9NZQ7 290 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 CDH22Q9UJ99 828 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 PHRF1Q9P1Y6 1649 aaKnown RBP11.07□□□□□ -0.64
RPL28-201ENST00000344063 KPNA4O00629 521 aaPredicted RBP11.07□□□□□ -0.64
RPL28-201ENST00000344063 ZNF286BP0CG31 522 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 CDH2P19022 906 aaPredicted RBP11.07□□□□□ -0.64
RPL28-201ENST00000344063 RPL14P50914 215 aaKnown RBP11.07□□□□□ -0.64
RPL28-201ENST00000344063 SLC18A1P54219 525 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 DLG1Q12959 904 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 POU6F1Q14863 301 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 SLC4A11Q8NBS3 891 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 FAM156AQ8NDB6 213 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 ADAM32Q8TC27 787 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 BORCS6Q96GS4 357 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 FBXL18Q96ME1 805 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 POPDC2Q9HBU9 364 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 TIAM2Q8IVF5 1701 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 C17orf102A2RUQ5 167 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 MAGEC1O60732 1142 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 ARL2P36404 184 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 FASTKQ14296 549 aaKnown RBP11.07□□□□□ -0.64
RPL28-201ENST00000344063 CMC1Q7Z7K0 106 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 XYLT1Q86Y38 959 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 MAGEE2Q8TD90 523 aaPredicted RBP11.07□□□□□ -0.64
RPL28-201ENST00000344063 SNX19Q92543 992 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 SERAC1Q96JX3 654 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 CIB1Q99828 191 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 NIFKQ9BYG3 293 aaKnown RBP11.07□□□□□ -0.64
RPL28-201ENST00000344063 LIN28AQ9H9Z2 209 aaKnown RBP11.07□□□□□ -0.64
RPL28-201ENST00000344063 ATAD3AQ9NVI7 634 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 DDX43Q9NXZ2 648 aaKnown RBP11.07□□□□□ -0.64
RPL28-201ENST00000344063 RABGEF1Q9UJ41 708 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 LGALS2P05162 132 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 THP07101 528 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 HMBSP08397 361 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 CDH3P22223 829 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 PSMB9P28065 219 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 RGS4P49798 205 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 NRLP54845 237 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 MTX3Q5HYI7 312 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 GLB1LQ6UWU2 654 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 DRAXINQ8NBI3 349 aaPredicted RBP11.07□□□□□ -0.64
RPL28-201ENST00000344063 HSPBAP1Q96EW2 488 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 APOBEC3GQ9HC16 384 aaKnown RBP11.07□□□□□ -0.64
RPL28-201ENST00000344063 CROTQ9UKG9 612 aa11.07□□□□□ -0.64
RPL28-201ENST00000344063 NOVP48745 357 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 NFYCQ13952 458 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 RSBN1Q5VWQ0 802 aaPredicted RBP11.06□□□□□ -0.64
RPL28-201ENST00000344063 DHRSXQ8N5I4 330 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 ANKRD52Q8NB46 1076 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 GLIS1Q8NBF1 620 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 ASIC4Q96FT7 647 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 APBA2Q99767 749 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 BBS2Q9BXC9 721 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 SETD4Q9NVD3 440 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 UTP6Q9NYH9 597 aaKnown RBP11.06□□□□□ -0.64
RPL28-201ENST00000344063 PSMD13Q9UNM6 376 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 KAT6AQ92794 2004 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 TMEM114B3SHH9 223 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 RGS5O15539 181 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 VAPBO95292 243 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 FCGR1AP12314 374 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 TPSB2P20231 275 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 NR4A1P22736 598 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 CRHR1P34998 444 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 DGCR6Q14129 220 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 TPSAB1Q15661 275 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 CYP51A1Q16850 503 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 TNIP2Q8NFZ5 429 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 OR52K1Q8NGK4 314 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 RBBP8Q99708 897 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 NPAS2Q99743 824 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 C17orf80Q9BSJ5 609 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 PRDM12Q9H4Q4 367 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 SYTL2Q9HCH5 934 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 WDR70Q9NW82 654 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 EURLQ9NYK6 297 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 GPRC5DQ9NZD1 345 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 MLNP12872 115 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 YBX3P16989 372 aaKnown RBP eCLIP11.06□□□□□ -0.642e-8■■■■□ 19.5
RPL28-201ENST00000344063 LCLAT1Q6UWP7 414 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 PACS1Q6VY07 963 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 UNC5AQ6ZN44 842 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 STK32CQ86UX6 486 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 MIER2Q8N344 545 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 EFHBQ8N7U6 833 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 FAM162AQ96A26 154 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 CELF6Q96J87 481 aaKnown RBP11.06□□□□□ -0.64
RPL28-201ENST00000344063 SH3GL1Q99961 368 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 RIPK3Q9Y572 518 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 CNTNAP2Q9UHC6 1331 aa11.06□□□□□ -0.64
RPL28-201ENST00000344063 B4GALT5O43286 388 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 CLASP2O75122 1294 aaKnown RBP11.05□□□□□ -0.64
RPL28-201ENST00000344063 SIN3BO75182 1162 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 TADA2AO75478 443 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 MYO1DO94832 1006 aa11.05□□□□□ -0.64
RPL28-201ENST00000344063 FARP2O94887 1054 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms