RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 PYROXD2Q8N2H3 581 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.8■□□□□ 0.123e-7■□□□□ 8.7
VAPA-201ENST00000340541 SUN2Q9UH99 717 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 PI4KAP42356 2102 aa15.8■□□□□ 0.12
VAPA-201ENST00000340541 TMEM8BA6NDV4 472 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 SIN3BO75182 1162 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 RHOCP08134 193 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 ITPKAP23677 461 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 PSMA2P25787 234 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 TPMTP51580 245 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 ST8SIA6P61647 398 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 RPS14P62263 151 aaKnown RBP15.79■□□□□ 0.12
VAPA-201ENST00000340541 GFPT1Q06210 699 aaPredicted RBP15.79■□□□□ 0.12
VAPA-201ENST00000340541 ZNF33AQ06730 810 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 SEMA3BQ13214 749 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 HNRNPDQ14103 355 aaKnown RBP15.79■□□□□ 0.12
VAPA-201ENST00000340541 ASTE1Q2TB18 679 aaPredicted RBP15.79■□□□□ 0.12
VAPA-201ENST00000340541 UAP1L1Q3KQV9 507 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 C9orf64Q5T6V5 341 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 PIP4P1Q86T03 277 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 CACUL1Q86Y37 369 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 OR8K1Q8NGG5 319 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 FNIP1Q8TF40 1166 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 FRS2Q8WU20 508 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 PRCCQ92733 491 aaPredicted RBP15.79■□□□□ 0.12
VAPA-201ENST00000340541 PTPRN2Q92932 1015 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 TRIM11Q96F44 468 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 SIPA1Q96FS4 1042 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 ZNF419Q96HQ0 510 aaPredicted RBP15.79■□□□□ 0.12
VAPA-201ENST00000340541 RBSNQ9H1K0 784 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 RSPH9Q9H1X1 276 aaPredicted RBP15.79■□□□□ 0.12
VAPA-201ENST00000340541 FBRSQ9HAH7 460 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 NDFIP2Q9NV92 336 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 VPS28Q9UK41 221 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 FZD10Q9ULW2 581 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 NUMA1Q14980 2115 aa15.79■□□□□ 0.12
VAPA-201ENST00000340541 TARSL2A2RTX5 802 aaKnown RBP15.78■□□□□ 0.12
VAPA-201ENST00000340541 PCNX2A6NKB5 2137 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 SNAP91O60641 907 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 VAV1P15498 845 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 RHOQP17081 205 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 OR1E1P30953 314 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 L1CAMP32004 1257 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 EIF4A3P38919 411 aaKnown RBP15.78■□□□□ 0.12
VAPA-201ENST00000340541 ATXN3P54252 364 aaPredicted RBP15.78■□□□□ 0.12
VAPA-201ENST00000340541 TBX2Q13207 712 aaPredicted RBP15.78■□□□□ 0.12
VAPA-201ENST00000340541 C6orf118Q5T5N4 469 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 SCYL2Q6P3W7 929 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 CYP4V2Q6ZWL3 525 aaPredicted RBP15.78■□□□□ 0.12
VAPA-201ENST00000340541 ARMCX6Q7L4S7 300 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 VPS36Q86VN1 386 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 GAS2L3Q86XJ1 694 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 HDDC3Q8N4P3 179 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 KDF1Q8NAX2 398 aaPredicted RBP15.78■□□□□ 0.12
VAPA-201ENST00000340541 OR7D4Q8NG98 312 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 FOXJ1Q92949 421 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 PEBP4Q96S96 227 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 PPP1R9BQ96SB3 815 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 THAP2Q9H0W7 228 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 MUC3BQ9H195 1237 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 CAPN10Q9HC96 672 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 ABHD10Q9NUJ1 306 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 WSB2Q9NYS7 404 aaPredicted RBP15.78■□□□□ 0.12
VAPA-201ENST00000340541 MYO1AQ9UBC5 1043 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 SCINQ9Y6U3 715 aa15.78■□□□□ 0.12
VAPA-201ENST00000340541 ASCC3Q8N3C0 2202 aaKnown RBP15.78■□□□□ 0.12
VAPA-201ENST00000340541 EDDM13A0A1B0GTR0 161 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 ILVBLA1L0T0 632 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 ATP9BO43861 1147 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 MFAP3LO75121 409 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 ZMPSTE24O75844 475 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 MT-CO1P00395 513 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 CFIP05156 583 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 SYPP08247 313 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 CD6P30203 668 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 AIF1P55008 147 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 FOXC1Q12948 553 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 SLC14A1Q13336 389 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 EFHC2Q5JST6 749 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 SYCP2LQ5T4T6 812 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 ALKBH5Q6P6C2 394 aaKnown RBP15.77■□□□□ 0.12
VAPA-201ENST00000340541 UNQ6494/PRO21346Q6UXR6 183 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 ZNF783Q6ZMS7 281 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 DEFB119Q8N690 84 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 DCAF4L2Q8NA75 395 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 TBC1D31Q96DN5 1066 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 ARHGEF26Q96DR7 871 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 FAM129BQ96TA1 746 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 RETREG1Q9H6L5 497 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 MRPL47Q9HD33 250 aaKnown RBP15.77■□□□□ 0.12
VAPA-201ENST00000340541 TMEM248Q9NWD8 314 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 SUSD2Q9UGT4 822 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 VPS51Q9UID3 782 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 HS3ST2Q9Y278 367 aa15.77■□□□□ 0.12
VAPA-201ENST00000340541 ARHGAP33O14559 1287 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 OPHN1O60890 802 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 NDUFS2O75306 463 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 LRCH4O75427 683 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 CYP1A2P05177 515 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 SRCP12931 536 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms