RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 OR7D4Q8NG98 312 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 OR8D1Q8WZ84 308 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 ARHGEF26Q96DR7 871 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 CHP1Q99653 195 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 RSPH9Q9H1X1 276 aaPredicted RBP19.65■□□□□ 0.74
SYNE4-202ENST00000340477 MAGEH1Q9H213 219 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 LUC7LQ9NQ29 371 aaKnown RBP19.65■□□□□ 0.74
SYNE4-202ENST00000340477 ITM2CQ9NQX7 267 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 GPATCH2LQ9NWQ4 482 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 USP36Q9P275 1121 aaKnown RBP19.65■□□□□ 0.74
SYNE4-202ENST00000340477 ZNF212Q9UDV6 495 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 NENFQ9UMX5 172 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 HS3ST2Q9Y278 367 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 NCKAP1Q9Y2A7 1128 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 EP300Q09472 2414 aaPredicted RBP19.64■□□□□ 0.74
SYNE4-202ENST00000340477 GOLGA6L6A8MZA4 724 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 ATP9BO43861 1147 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 SNAP91O60641 907 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 RECQLP46063 649 aaPredicted RBP19.64■□□□□ 0.73
SYNE4-202ENST00000340477 TPMTP51580 245 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 RPS14P62263 151 aaKnown RBP19.64■□□□□ 0.73
SYNE4-202ENST00000340477 SLC20A2Q08357 652 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 POLD3Q15054 466 aaPredicted RBP19.64■□□□□ 0.73
SYNE4-202ENST00000340477 HADHQ16836 314 aaKnown RBP19.64■□□□□ 0.73
SYNE4-202ENST00000340477 BOLA3Q53S33 107 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 PPP6R3Q5H9R7 873 aaPredicted RBP19.64■□□□□ 0.73
SYNE4-202ENST00000340477 LYSMD4Q5XG99 296 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 TC2NQ8N9U0 490 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 GANCQ8TET4 914 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 PSMB7Q99436 277 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 ARRDC1-AS1Q9H2J1 176 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 MTG2Q9H4K7 406 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 ZWILCHQ9H900 591 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 SPTLC3Q9NUV7 552 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 MBD1Q9UIS9 605 aaPredicted RBP19.64■□□□□ 0.73
SYNE4-202ENST00000340477 GPR179Q6PRD1 2367 aa19.64■□□□□ 0.73
SYNE4-202ENST00000340477 ABCA7Q8IZY2 2146 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 ADH1BP00325 375 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 MPLP40238 635 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 SPEM2Q0P670 501 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 SEMA3BQ13214 749 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 DLG2Q15700 870 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 C9orf64Q5T6V5 341 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 ARMCX6Q7L4S7 300 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 TMEFF1Q8IYR6 380 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 DCLK2Q8N568 766 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 FOXJ1Q92949 421 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 PEBP4Q96S96 227 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 PACSIN1Q9BY11 444 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 MAGEB5Q9BZ81 275 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 NEU3Q9UQ49 428 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 NUP205Q92621 2012 aa19.63■□□□□ 0.73
SYNE4-202ENST00000340477 PTPRZ1P23471 2315 aaPredicted RBP19.62■□□□□ 0.73
SYNE4-202ENST00000340477 CXorf51AA0A1B0GTR3 108 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 ZSCAN5CA6NGD5 496 aaPredicted RBP19.62■□□□□ 0.73
SYNE4-202ENST00000340477 C1QTNF3-AMACRE9PGA6 284 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 H3BRJ5 948 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 ALOX15BO15296 676 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 BNIP3LO60238 219 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 IPO7O95373 1038 aaKnown RBP19.62■□□□□ 0.73
SYNE4-202ENST00000340477 IL1BP01584 269 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 IGLV3-19P01714 112 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 SRCP12931 536 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 CYLC1P35663 651 aaPredicted RBP19.62■□□□□ 0.73
SYNE4-202ENST00000340477 ARL4AP40617 200 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 PSMD8P48556 350 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 YBEYP58557 167 aaPredicted RBP19.62■□□□□ 0.73
SYNE4-202ENST00000340477 CST6Q15828 149 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 PARP15Q460N3 678 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 SYCP2LQ5T4T6 812 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 FAM46CQ5VWP2 391 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 LINGO4Q6UY18 593 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 RFX8Q6ZV50 586 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 Q6ZVU0 165 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 FAM124AQ86V42 546 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 MMAAQ8IVH4 418 aaKnown RBP19.62■□□□□ 0.73
SYNE4-202ENST00000340477 RHOT2Q8IXI1 618 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 KIAA2013Q8IYS2 634 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 STK40Q8N2I9 435 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 ARFGAP1Q8N6T3 406 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 FRMD1Q8N878 549 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 C12orf50Q8NA57 414 aaPredicted RBP19.62■□□□□ 0.73
SYNE4-202ENST00000340477 HSPH1Q92598 858 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 PTPRN2Q92932 1015 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 TOE1Q96GM8 510 aaKnown RBP19.62■□□□□ 0.73
SYNE4-202ENST00000340477 BTBD6Q96KE9 485 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 PANX2Q96RD6 677 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 KCTD15Q96SI1 283 aaPredicted RBP19.62■□□□□ 0.73
SYNE4-202ENST00000340477 CEP44Q9C0F1 390 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 PABPC3Q9H361 631 aaKnown RBP19.62■□□□□ 0.73
SYNE4-202ENST00000340477 VPS45Q9NRW7 570 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.62■□□□□ 0.73
SYNE4-202ENST00000340477 CHD5Q8TDI0 1954 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 GVINP1Q7Z2Y8 2422 aa19.62■□□□□ 0.73
SYNE4-202ENST00000340477 SDK1Q7Z5N4 2213 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 BCLAF3A2AJT9 711 aaKnown RBP19.61■□□□□ 0.73
SYNE4-202ENST00000340477 MEI4A8MW99 385 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 WASH4PA8MWX3 477 aa19.61■□□□□ 0.73
SYNE4-202ENST00000340477 SERPINH1P50454 418 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms