RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 RAB6CQ53S08 254 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 FAM47CQ5HY64 1035 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 ZBTB41Q5SVQ8 909 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 GALNT18Q6P9A2 607 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 TNIP2Q8NFZ5 429 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 LPGAT1Q92604 370 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 TOP1MTQ969P6 601 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 RNF157Q96PX1 679 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 MROQ9BYG7 248 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 NACA2Q9H009 215 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 ILKAPQ9H0C8 392 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 RAB6CQ9H0N0 254 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 POLR1BQ9H9Y6 1135 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 GPRC5DQ9NZD1 345 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 ADA2Q9NZK5 511 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 NXF1Q9UBU9 619 aaKnown RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 RBMX2Q9Y388 322 aaKnown RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 MRPL11Q9Y3B7 192 aaKnown RBP9.58□□□□□ -0.88
NECAP1-201ENST00000339754 CPQQ9Y646 472 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 STYXL1Q9Y6J8 313 aa9.58□□□□□ -0.88
NECAP1-201ENST00000339754 PSME4Q14997 1843 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 WDR27A2RRH5 827 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 E7ENX8 843 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 KPNA4O00629 521 aaPredicted RBP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 JAK1P23458 1154 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 RCVRNP35243 200 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 GRIA3P42263 894 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 IREB2P48200 963 aaKnown RBP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 GSSP48637 474 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 LIG4P49917 911 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 PSME3P61289 254 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 NME3Q13232 169 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 CAMK2BQ13554 666 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 STILQ15468 1287 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 TKFCQ3LXA3 575 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 TREML2Q5T2D2 321 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 SH3PXD2AQ5TCZ1 1133 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 ILDR2Q71H61 639 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 IFNLR1Q8IU57 520 aaPredicted RBP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 CNDP2Q96KP4 475 aaKnown RBP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 CCDC138Q96M89 665 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 ALPK1Q96QP1 1244 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 CTRCQ99895 268 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 GATA5Q9BWX5 397 aaPredicted RBP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 MUC3BQ9H195 1237 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 CISHQ9NSE2 258 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 TMEM9Q9P0T7 183 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 COL20A1Q9P218 1284 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 VPS51Q9UID3 782 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 AGO2Q9UKV8 859 aaKnown RBP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 CNOT6Q9ULM6 557 aaKnown RBP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 TCAF1Q9Y4C2 921 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 C1orf232A0A0U1RR37 186 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 TRIM24O15164 1050 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 PAPSS1O43252 624 aaPredicted RBP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 TRIM13O60858 407 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 MAP3K6O95382 1288 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 PTPN2P17706 415 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 TFEBP19484 476 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 TPSB2P20231 275 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 MATN1P21941 496 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 NME5P56597 212 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 NSUN2Q08J23 767 aaKnown RBP eCLIP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 TRAP1Q12931 704 aaKnown RBP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 TPSAB1Q15661 275 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 INAQ16352 499 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 SLC36A3Q495N2 470 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 KCNT2Q6UVM3 1135 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 HHIPL2Q6UWX4 724 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 KCTD8Q6ZWB6 473 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 NIPA1Q7RTP0 329 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 TTC30AQ86WT1 665 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 PCDH20Q8N6Y1 951 aaKnown RBP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 FAM110BQ8TC76 370 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 ANKRD36BP1Q96IX9 119 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 ZBTB45Q96K62 511 aaPredicted RBP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 MARK4Q96L34 752 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 C1orf50Q9BV19 199 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 VRTNQ9H8Y1 702 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 UTP6Q9NYH9 597 aaKnown RBP9.57□□□□□ -0.88
NECAP1-201ENST00000339754 UBIAD1Q9Y5Z9 338 aa9.57□□□□□ -0.88
NECAP1-201ENST00000339754 ADGRA2Q96PE1 1338 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 FAM47E-STBD1D6RA91 191 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 TIPRLO75663 272 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 SEC24DO94855 1032 aaPredicted RBP9.56□□□□□ -0.88
NECAP1-201ENST00000339754 CCNE2O96020 404 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 ASS1P00966 412 aaKnown RBP9.56□□□□□ -0.88
NECAP1-201ENST00000339754 LTFP02788 710 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 CCNA2P20248 432 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 POLR2BP30876 1174 aaKnown RBP9.56□□□□□ -0.88
NECAP1-201ENST00000339754 EPHX2P34913 555 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 ETFBP38117 255 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 MAGEA12P43365 314 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 CCR10P46092 362 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 RPL14P50914 215 aaKnown RBP9.56□□□□□ -0.88
NECAP1-201ENST00000339754 CRADDP78560 199 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 MRPS9P82933 396 aaKnown RBP9.56□□□□□ -0.88
NECAP1-201ENST00000339754 MERTKQ12866 999 aa9.56□□□□□ -0.88
NECAP1-201ENST00000339754 SEL1L3Q68CR1 1132 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms