RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 NKX2-5P52952 324 aaPredicted RBP12.83□□□□□ -0.36
BRPF3-201ENST00000339717 POU5F1BQ06416 359 aa12.83□□□□□ -0.36
BRPF3-201ENST00000339717 CENPPQ6IPU0 288 aa12.83□□□□□ -0.36
BRPF3-201ENST00000339717 HERC6Q8IVU3 1022 aa12.83□□□□□ -0.36
BRPF3-201ENST00000339717 ATAD1Q8NBU5 361 aa12.83□□□□□ -0.36
BRPF3-201ENST00000339717 OR5J2Q8NH18 312 aa12.83□□□□□ -0.36
BRPF3-201ENST00000339717 POTEMA6NI47 508 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 TOR1BO14657 336 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 PDGFRAP16234 1089 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 PTPN2P17706 415 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 KCNA5P22460 613 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 UQCRC1P31930 480 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 PIK3CGP48736 1102 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 TTLL12Q14166 644 aaPredicted RBP12.82□□□□□ -0.36
BRPF3-201ENST00000339717 POTEGQ6S5H5 508 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 ZNF677Q86XU0 584 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 ZNF540Q8NDQ6 660 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 POP5Q969H6 163 aaKnown RBP12.82□□□□□ -0.36
BRPF3-201ENST00000339717 RNF145Q96MT1 663 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 NODALQ96S42 347 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 PSD2Q9BQI7 771 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 LRRC4BQ9NT99 713 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 ZDHHC7Q9NXF8 308 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 MYO5CQ9NQX4 1742 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 LOC102724428A0A0B4J2F2 783 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 ZNF99A8MXY4 864 aaPredicted RBP12.82□□□□□ -0.36
BRPF3-201ENST00000339717 RALAP11233 206 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 CD58P19256 250 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 PDHA2P29803 388 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 HNF1BP35680 557 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 SLC18A1P54219 525 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 SIK1P57059 783 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 GTF2H3Q13889 308 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 MTX3Q5HYI7 312 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 EARS2Q5JPH6 523 aaKnown RBP12.82□□□□□ -0.36
BRPF3-201ENST00000339717 ZYG11AQ6WRX3 759 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 USP43Q70EL4 1123 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 FGD2Q7Z6J4 655 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 RASGEF1CQ8N431 466 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 LZTR1Q8N653 840 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 DHX33Q9H6R0 707 aaKnown RBP12.82□□□□□ -0.36
BRPF3-201ENST00000339717 ENOPH1Q9UHY7 261 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 CPDO75976 1380 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 STX4Q12846 297 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 CLYBLQ8N0X4 340 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 SRFBP1Q8NEF9 429 aaKnown RBP12.82□□□□□ -0.36
BRPF3-201ENST00000339717 ACTRT2Q8TDY3 377 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 ZNF431Q8TF32 576 aaPredicted RBP12.82□□□□□ -0.36
BRPF3-201ENST00000339717 CCDC126Q96EE4 140 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 GLT1D1Q96MS3 346 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 ZSWIM5Q9P217 1185 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 GSTK1Q9Y2Q3 226 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 LMTK3Q96Q04 1460 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.82□□□□□ -0.36
BRPF3-201ENST00000339717 TNNI3P19429 210 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 KELP23276 732 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 PRMT2P55345 433 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 AGAP7PQ5VUJ5 663 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 TMPRSS11AQ6ZMR5 421 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 ADHFE1Q8IWW8 467 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 OR5T2Q8NGG2 359 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 METTL6Q8TCB7 284 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 PANX3Q96QZ0 392 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 SEPHS2Q99611 448 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 ROGDIQ9GZN7 287 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 ZNHIT2Q9UHR6 403 aa12.82□□□□□ -0.36
BRPF3-201ENST00000339717 PRDM15P57071 1507 aaPredicted RBP12.81□□□□□ -0.36
BRPF3-201ENST00000339717 MED7O43513 233 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 CDC40O60508 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
BRPF3-201ENST00000339717 VAPBO95292 243 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 ZNF182P17025 639 aaPredicted RBP12.81□□□□□ -0.36
BRPF3-201ENST00000339717 ACTR2P61160 394 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 FGL2Q14314 439 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 FBXO33Q7Z6M2 555 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 GPR180Q86V85 440 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 MIB1Q86YT6 1006 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 COLGALT2Q8IYK4 626 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 SNX19Q92543 992 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 SLC39A13Q96H72 371 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 CCDC120Q96HB5 630 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 MTMR12Q9C0I1 747 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 COQ10BQ9H8M1 238 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 C12orf10Q9HB07 376 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 TMLHEQ9NVH6 421 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 H0Y858 1186 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 IRS4O14654 1257 aaPredicted RBP12.81□□□□□ -0.36
BRPF3-201ENST00000339717 NMT2O60551 498 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 AVILO75366 819 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 TDP2O95551 362 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 PROSER3Q2NL68 480 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 ESCO2Q56NI9 601 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 RBM48Q5RL73 367 aaKnown RBP12.81□□□□□ -0.36
BRPF3-201ENST00000339717 DNAAF5Q86Y56 855 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 CENPLQ8N0S6 344 aaPredicted RBP12.81□□□□□ -0.36
BRPF3-201ENST00000339717 SLC15A4Q8N697 577 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 CENPIQ92674 756 aaPredicted RBP12.81□□□□□ -0.36
BRPF3-201ENST00000339717 TM9SF2Q99805 663 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 GSDMCQ9BYG8 508 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 THAP2Q9H0W7 228 aa12.81□□□□□ -0.36
BRPF3-201ENST00000339717 HOXB6P17509 224 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms