RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 DENND1CQ8IV53 801 aa22.88■■□□□ 1.25
PDLIM2-203ENST00000339162 PSMG2Q969U7 264 aa22.88■■□□□ 1.25
PDLIM2-203ENST00000339162 PABPC5Q96DU9 382 aaKnown RBP22.88■■□□□ 1.25
PDLIM2-203ENST00000339162 GLOD4Q9HC38 313 aa22.88■■□□□ 1.25
PDLIM2-203ENST00000339162 CXXC1Q9P0U4 656 aaPredicted RBP22.88■■□□□ 1.25
PDLIM2-203ENST00000339162 SAMD15Q9P1V8 674 aa22.88■■□□□ 1.25
PDLIM2-203ENST00000339162 ZNF212Q9UDV6 495 aa22.88■■□□□ 1.25
PDLIM2-203ENST00000339162 HBS1LQ9Y450 684 aaKnown RBP22.88■■□□□ 1.25
PDLIM2-203ENST00000339162 RPS6KL1Q9Y6S9 549 aa22.88■■□□□ 1.25
PDLIM2-203ENST00000339162 DRGXA6NNA5 263 aa22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 NEBLO76041 1014 aa22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 FGF18O76093 207 aa22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 MT-ND3P03897 115 aa22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 OR1E1P30953 314 aa22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 NDST2P52849 883 aa22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 SNX30Q5VWJ9 437 aa22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 STEAP4Q687X5 459 aa22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 TIGD7Q6NT04 549 aaPredicted RBP22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 DNAJB7Q7Z6W7 309 aaPredicted RBP22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 IPMKQ8NFU5 416 aa22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 MYRFLQ96LU7 910 aa22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 CEP295NLQ96MC4 621 aa22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 FCRL3Q96P31 734 aaPredicted RBP22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 BFARQ9NZS9 450 aa22.87■■□□□ 1.25
PDLIM2-203ENST00000339162 ERI2A8K979 691 aaKnown RBP22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 TRIM49D1C9J1S8 452 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 SCAMP3O14828 347 aaKnown RBP22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 PRPF4O43172 522 aaKnown RBP eCLIP22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 BAIAP3O94812 1187 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 PEX11BO96011 259 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 KPNA1P52294 538 aaPredicted RBP22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 SLC1A5Q15758 541 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 FAM133BQ5BKY9 247 aaKnown RBP22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 DENND1AQ8TEH3 1009 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 BADQ92934 168 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 WBP2Q969T9 261 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 CDK5RAP1Q96SZ6 601 aaKnown RBP22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 CCDC134Q9H6E4 229 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 LRRC40Q9H9A6 602 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 PCDHB12Q9Y5F1 795 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 PTPRSQ13332 1948 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 CCDC78A2IDD5 438 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 TCP11X1B4DZS4 312 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 KLKB1P03952 638 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 GBP2P32456 591 aaPredicted RBP22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 HARS2P49590 506 aaKnown RBP22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 MAXP61244 160 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 SLC10A7Q0GE19 358 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 VEPH1Q14D04 833 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 OVCA2Q8WZ82 227 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 CYP2S1Q96SQ9 504 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 ZBED2Q9BTP6 218 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 SMPD4Q9NXE4 827 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 HSFX1Q9UBD0 423 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 GRID1Q9ULK0 1009 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 SMG5Q9UPR3 1016 aaKnown RBP22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 INSL5Q9Y5Q6 135 aa22.86■■□□□ 1.25
PDLIM2-203ENST00000339162 F5H5T6 163 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 CACNG3O60359 315 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 ACSL4O60488 711 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 PMPCBO75439 489 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 ACVRL1P37023 503 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 C1QTNF8P60827 252 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 POLD3Q15054 466 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 TTC39BQ5VTQ0 682 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 CKAP2Q8WWK9 683 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 FCRL5Q96RD9 977 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 ATXN3LQ9H3M9 355 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 SP110Q9HB58 689 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 TTC24A2A3L6 582 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 RAMP2O60895 175 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 ALDH1A2O94788 518 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 POLBP06746 335 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 ERVK-10P10266 1014 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 PYGBP11216 843 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 EN2P19622 333 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 ZNF669Q96BR6 464 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 MFSD3Q96ES6 412 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 NT5MQ9NPB1 228 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 CHRAC1Q9NRG0 131 aa22.85■■□□□ 1.25
PDLIM2-203ENST00000339162 EBAG9O00559 213 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 ASMTLO95671 621 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 FGBP02675 491 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 F7P08709 466 aaPredicted RBP22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 CNPP09543 421 aaKnown RBP22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 LINC00271P0C7V0 271 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 RPS24P62847 133 aaKnown RBP22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 ITKQ08881 620 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 MROH9Q5TGP6 573 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 TMEM150AQ86TG1 271 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 FIBCD1Q8N539 461 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 BANPQ8N9N5 519 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 TTC16Q8NEE8 873 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 SGSM3Q96HU1 749 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 ZNF334Q9HCZ1 680 aaPredicted RBP22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 FNIP2Q9P278 1114 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 AAR2Q9Y312 384 aaKnown RBP22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 ZFP37Q9Y6Q3 630 aaPredicted RBP22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 STC2O76061 302 aa22.84■■□□□ 1.25
PDLIM2-203ENST00000339162 CORO1AP31146 461 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms