RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 ARID5BQ14865 1188 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 CCDC92Q53HC0 331 aaPredicted RBP12.45□□□□□ -0.42
FN1-202ENST00000336916 TCAIMQ8N3R3 496 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 ZFRQ96KR1 1074 aaKnown RBP12.45□□□□□ -0.42
FN1-202ENST00000336916 IRGMA1A4Y4 181 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 ALDH9A1P49189 494 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 LY6KQ17RY6 165 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 NOMO2Q5JPE7 1267 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 MACC1Q6ZN28 852 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 TRAPPC5Q8IUR0 188 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 TAGLN3Q9UI15 199 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 NDUFAF1Q9Y375 327 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 A0A087X0T9 212 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 OR6C75A6NL08 312 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 NR5A2O00482 541 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 FAM228BP0C875 321 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 VAV1P15498 845 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 POLD2P49005 469 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 RGL4Q8IZJ4 473 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 OR8D1Q8WZ84 308 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 WNT8BQ93098 351 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 CAVIN3Q969G5 261 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 RNFT2Q96EX2 444 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 RABGEF1Q9UJ41 708 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 PLEKP08567 350 aaPredicted RBP12.45□□□□□ -0.42
FN1-202ENST00000336916 BRMS1LQ5PSV4 323 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 GEMIN8Q9NWZ8 242 aaKnown RBP12.45□□□□□ -0.42
FN1-202ENST00000336916 STON1Q9Y6Q2 735 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 ZNF682O95780 498 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 CTNNB1P35222 781 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 SERPINB5P36952 375 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 SLC1A6P48664 564 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 VSTM1Q6UX27 236 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 TMEM26Q6ZUK4 368 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 SLAIN1Q8ND83 568 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 ACTL9Q8TC94 416 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 PAFAH2Q99487 392 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 MTF1Q14872 753 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 NFIL3Q16649 462 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 LSM12Q3MHD2 195 aaKnown RBP12.45□□□□□ -0.42
FN1-202ENST00000336916 SENP8Q96LD8 212 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 NSMCE2Q96MF7 247 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 GPRC5CQ9NQ84 441 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 CYP3A7-CYP3A51PA0A087WV96 503 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 FOXN1O15353 648 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 PPIBP23284 216 aaKnown RBP12.45□□□□□ -0.42
FN1-202ENST00000336916 CYP3A7P24462 503 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 RPL22P35268 128 aaKnown RBP12.45□□□□□ -0.42
FN1-202ENST00000336916 PARP6Q2NL67 630 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 DEFB115Q30KQ5 88 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 AFTPHQ6ULP2 937 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 CHAMP1Q96JM3 812 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 ADAM2Q99965 735 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 GINS4Q9BRT9 223 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 PHTF1Q9UMS5 762 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 TBC1D30Q9Y2I9 924 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 GSTK1Q9Y2Q3 226 aa12.45□□□□□ -0.42
FN1-202ENST00000336916 TDRKHQ9Y2W6 561 aaKnown RBP12.45□□□□□ -0.42
FN1-202ENST00000336916 KCNH1O95259 989 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 ANXA5P08758 320 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 AMD1P17707 334 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 LGALS3BPQ08380 585 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 MAP2K5Q13163 448 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 RASA2Q15283 850 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 LRRC38Q5VT99 294 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 NECAB2Q7Z6G3 386 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 MILR1Q7Z6M3 343 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 PAIP2BQ9ULR5 123 aaKnown RBP12.44□□□□□ -0.42
FN1-202ENST00000336916 COLEC10Q9Y6Z7 277 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 INAQ16352 499 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 TMEM119Q4V9L6 283 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 FAM220AQ7Z4H9 259 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 FAXDC2Q96IV6 333 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 TMEM121Q9BTD3 319 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 CNGB3Q9NQW8 809 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 CCZ1BP86790 482 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 CCZ1P86791 482 aaPredicted RBP12.44□□□□□ -0.42
FN1-202ENST00000336916 PPIGQ13427 754 aaKnown RBP eCLIP12.44□□□□□ -0.42
FN1-202ENST00000336916 SEC23AQ15436 765 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 TAF13Q15543 124 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 LGI2Q8N0V4 545 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 AVL9Q8NBF6 648 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 SHPRHQ149N8 1683 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 MGRN1O60291 552 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 YBX3P16989 372 aaKnown RBP eCLIP12.44□□□□□ -0.422e-58■□□□□ 9.3
FN1-202ENST00000336916 PAPD7Q5XG87 772 aaKnown RBP12.44□□□□□ -0.42
FN1-202ENST00000336916 WDR18Q9BV38 432 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 CRYMQ14894 314 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 CRELD1Q96HD1 420 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 ARL15Q9NXU5 204 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 PNMA8BQ9ULN7 279 aaPredicted RBP12.44□□□□□ -0.42
FN1-202ENST00000336916 PTCH2Q9Y6C5 1203 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 NUDT14O95848 222 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 IL6P05231 212 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 ZBTB48P10074 688 aaPredicted RBP12.44□□□□□ -0.42
FN1-202ENST00000336916 STAT5AP42229 794 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 TBL3Q12788 808 aaKnown RBP12.44□□□□□ -0.42
FN1-202ENST00000336916 TRAF7Q6Q0C0 670 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 FAM92BQ6ZTR7 304 aa12.44□□□□□ -0.42
FN1-202ENST00000336916 CCDC103Q8IW40 242 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms