RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 NAT14Q8WUY8 206 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 LINC01599Q8WXQ3 324 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 MCUR1Q96AQ8 359 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 CCDC124Q96CT7 223 aaKnown RBP9.02□□□□□ -0.96
SNCA-201ENST00000336904 FAM161BQ96MY7 647 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 SMIM14Q96QK8 99 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 SEPT5Q99719 369 aaPredicted RBP9.02□□□□□ -0.96
SNCA-201ENST00000336904 PLCD4Q9BRC7 762 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 PHACTR1Q9C0D0 580 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 PPCSQ9HAB8 311 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 TAS2R1Q9NYW7 299 aa9.02□□□□□ -0.96
SNCA-201ENST00000336904 A0A096LPK6 155 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 A0A0U1RQF3 1178 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 OR51F1A6NGY5 319 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 HACD1B0YJ81 288 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 PLIN3O60664 434 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 PEX11AO75192 247 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 HLA-DQB2P05538 268 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 SLC10A3P09131 477 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 CRHR1P34998 444 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 FCGRTP55899 365 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 SLC25A3Q00325 362 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 TUSC3Q13454 348 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 ALFQ53S48 1182 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 ZNF789Q5FWF6 425 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 MBLAC2Q68D91 279 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 TMEM173Q86WV6 379 aaPredicted RBP9.02□□□□□ -0.97
SNCA-201ENST00000336904 BHMTQ93088 406 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 LRRC39Q96DD0 335 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 SCYL1Q96KG9 808 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 CYP2S1Q96SQ9 504 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 FERMT1Q9BQL6 677 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 DNAI2Q9GZS0 605 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 CRISPLD1Q9H336 500 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 GMIPQ9P107 970 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 SIRPGQ9P1W8 387 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 ZNF180Q9UJW8 692 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 GIT1Q9Y2X7 761 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 NEMP2A6NFY4 417 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.02□□□□□ -0.97
SNCA-201ENST00000336904 TRPA1O75762 1119 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 FBXO21O94952 628 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 HAPLN1P10915 354 aaPredicted RBP9.02□□□□□ -0.97
SNCA-201ENST00000336904 TSPAN8P19075 237 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 CCNFP41002 786 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 PLK1P53350 603 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 HTRA3P83110 453 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 TSPY1Q01534 308 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 PCBP1Q15365 356 aaKnown RBP eCLIP9.02□□□□□ -0.97
SNCA-201ENST00000336904 CNGA3Q16281 694 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 TEDDM1Q5T9Z0 273 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 MARK2Q7KZI7 788 aaKnown RBP9.02□□□□□ -0.97
SNCA-201ENST00000336904 BZW1Q7L1Q6 419 aaKnown RBP9.02□□□□□ -0.97
SNCA-201ENST00000336904 TMEM86AQ8N2M4 240 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 ZNF781Q8N8C0 355 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 SH3RF2Q8TEC5 729 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 KCTD4Q8WVF5 259 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 PTCD3Q96EY7 689 aaKnown RBP9.02□□□□□ -0.97
SNCA-201ENST00000336904 THTPAQ9BU02 230 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 GBA3Q9H227 469 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 WDR55Q9H6Y2 383 aaPredicted RBP9.02□□□□□ -0.97
SNCA-201ENST00000336904 NT5MQ9NPB1 228 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 RBM22Q9NW64 420 aaKnown RBP eCLIP9.02□□□□□ -0.97
SNCA-201ENST00000336904 HS3ST4Q9Y661 456 aa9.02□□□□□ -0.97
SNCA-201ENST00000336904 TMEM233B4DJY2 109 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 SKAP2O75563 359 aaPredicted RBP9.01□□□□□ -0.97
SNCA-201ENST00000336904 PDE5AO76074 875 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 MT-CO1P00395 513 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 GABRB3P28472 473 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 PTPN4P29074 926 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 MSX2P35548 267 aaPredicted RBP9.01□□□□□ -0.97
SNCA-201ENST00000336904 SCNN1AP37088 669 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 PAPOLAP51003 745 aaKnown RBP9.01□□□□□ -0.97
SNCA-201ENST00000336904 CCDC15Q0P6D6 951 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 PREPLQ4J6C6 727 aaPredicted RBP9.01□□□□□ -0.97
SNCA-201ENST00000336904 RALGPS1Q5JS13 557 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 FAM171A1Q5VUB5 890 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 ARHGAP12Q8IWW6 846 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 RBM15BQ8NDT2 890 aaKnown RBP9.01□□□□□ -0.97
SNCA-201ENST00000336904 SMC1BQ8NDV3 1235 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 CD99L2Q8TCZ2 262 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 NSL1Q96IY1 281 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 VPS39Q96JC1 886 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 ZNF570Q96NI8 536 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 TASP1Q9H6P5 420 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 CYP4F12Q9HCS2 524 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 IGSF9Q9P2J2 1179 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 NEU3Q9UQ49 428 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 KCTD3Q9Y597 815 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 WASF2Q9Y6W5 498 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 MYLKQ15746 1914 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 IRAK2O43187 625 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 USP1O94782 785 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 JUNP05412 331 aaKnown RBP9.01□□□□□ -0.97
SNCA-201ENST00000336904 C2P06681 752 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 CKBP12277 381 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 TSHRP16473 764 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 HDCP19113 662 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 GP5P40197 560 aa9.01□□□□□ -0.97
SNCA-201ENST00000336904 EPHB1P54762 984 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms