RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TRPM7Q96QT4 1865 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 ATP9BO43861 1147 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 KCNE1P15382 129 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 WARSP23381 471 aaKnown RBP15.67■□□□□ 0.1
BRCC3-201ENST00000330045 ACAT1P24752 427 aaKnown RBP15.67■□□□□ 0.1
BRCC3-201ENST00000330045 SERPINB6P35237 376 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 LILRA4P59901 499 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 MPP3Q13368 585 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 PCBP1Q15365 356 aaKnown RBP eCLIP15.67■□□□□ 0.1
BRCC3-201ENST00000330045 SFT2D3Q587I9 215 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 CERCAMQ5T4B2 595 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 PAQR9Q6ZVX9 377 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 GALNT15Q8N3T1 639 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 EFCAB3Q8N7B9 438 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 TDRD5Q8NAT2 981 aaKnown RBP15.67■□□□□ 0.1
BRCC3-201ENST00000330045 RNF169Q8NCN4 708 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 SLC9A7Q96T83 725 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 SH3GL3Q99963 347 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 RTKNQ9BST9 563 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 RNF39Q9H2S5 420 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 ABHD16BQ9H3Z7 469 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 PIN4Q9Y237 131 aaKnown RBP15.67■□□□□ 0.1
BRCC3-201ENST00000330045 RAD54BQ9Y620 910 aa15.67■□□□□ 0.1
BRCC3-201ENST00000330045 TSC2P49815 1807 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 ERI2A8K979 691 aaKnown RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 FAM155AB1AL88 458 aaPredicted RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 NCAM2O15394 837 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 TIMM44O43615 452 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 RNASEH1O60930 286 aaKnown RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 H2AFYO75367 372 aaKnown RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 PTPN1P18031 435 aaKnown RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 TKTL1P51854 596 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 MTTPP55157 894 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 TPI1P60174 286 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 PPIDQ08752 370 aaKnown RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 KCTD11Q693B1 232 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 C17orf99Q6UX52 265 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 CLEC20AQ6ZU45 233 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 ACAD11Q709F0 780 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 KCNMB4Q86W47 210 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 ADAM32Q8TC27 787 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 AGR3Q8TD06 166 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 GDPD5Q8WTR4 605 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 KCNK16Q96T55 309 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 ARHGAP39Q9C0H5 1083 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 C20orf96Q9NUD7 363 aaPredicted RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 NRCAMQ92823 1304 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 MAGEB16A2A368 324 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 CHRM1P11229 460 aaPredicted RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 AXLP30530 894 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 CD68P34810 354 aaPredicted RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 AIF1P55008 147 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 CSE1LP55060 971 aaKnown RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 ROR2Q01974 943 aaKnown RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 MAP2K5Q13163 448 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 CRHR2Q13324 411 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 XKR4Q5GH76 650 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 TOP6BLQ8N6T0 577 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 LENG8Q96PV6 779 aaPredicted RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 OR52B2Q96RD2 323 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 MED10Q9BTT4 135 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 CCDC28BQ9BUN5 200 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 GATA5Q9BWX5 397 aaPredicted RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 ILKAPQ9H0C8 392 aaPredicted RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 GBA3Q9H227 469 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 TCF7L2Q9NQB0 619 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 ANLNQ9NQW6 1124 aa15.66■□□□□ 0.1
BRCC3-201ENST00000330045 CPSF2Q9P2I0 782 aaKnown RBP15.66■□□□□ 0.1
BRCC3-201ENST00000330045 NRP1O14786 923 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 LTFP02788 710 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 FYNP06241 537 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 RAG1P15918 1043 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 GLDCP23378 1020 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 NPY2RP49146 381 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 POLE2P56282 527 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 MAP3K7CLP57077 242 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 XIAPP98170 497 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 SEMA3BQ13214 749 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 MED21Q13503 144 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 NTAN1Q96AB6 310 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 WDR6Q9NNW5 1121 aaKnown RBP15.65■□□□□ 0.1
BRCC3-201ENST00000330045 CHRAC1Q9NRG0 131 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 IARS2Q9NSE4 1012 aaKnown RBP15.65■□□□□ 0.1
BRCC3-201ENST00000330045 OXSMQ9NWU1 459 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 SSX2IPQ9Y2D8 614 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 SLC10A3P09131 477 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 CYP2C9P11712 490 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 UQCRBP14927 111 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 PEX2P28328 305 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 BEX3Q00994 111 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 CAP1Q01518 475 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 CWF19L1Q69YN2 538 aaKnown RBP15.65■□□□□ 0.1
BRCC3-201ENST00000330045 KBTBD6Q86V97 674 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 MFN1Q8IWA4 741 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 NPWQ8N729 165 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 ACVR1CQ8NER5 493 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 VPS39Q96JC1 886 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 APOL2Q9BQE5 337 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 MLPHQ9BV36 600 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms