RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CNPP09543 421 aaKnown RBP20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 CA8P35219 290 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 RASA2Q15283 850 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 ITPRIPL1Q6GPH6 555 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 KLHDC10Q6PID8 442 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 CHSY1Q86X52 802 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 GPR65Q8IYL9 337 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 ANKRD42Q8N9B4 389 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 CLP1Q92989 425 aaKnown RBP20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 ZNF419Q96HQ0 510 aaPredicted RBP20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 RPRD1AQ96P16 312 aaPredicted RBP20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 CYTH2Q99418 400 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 PAFAH2Q99487 392 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 DHRS4Q9BTZ2 278 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 MLPHQ9BV36 600 aaPredicted RBP20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 RNF38Q9H0F5 515 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 ALPK3Q96L96 1907 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 C1QAP02745 245 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 SESN2P58004 480 aaPredicted RBP20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 ELF3P78545 371 aaPredicted RBP20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 KBTBD12Q3ZCT8 623 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 KCTD11Q693B1 232 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 UNC5AQ6ZN44 842 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 OTOP3Q7RTS5 596 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 CIR1Q86X95 450 aaPredicted RBP20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 SRRM1Q8IYB3 904 aaKnown RBP20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 IL12RB2Q99665 862 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 GKN1Q9NS71 199 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 PSMC3IPQ9P2W1 217 aaPredicted RBP20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 ZNF212Q9UDV6 495 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 TTLL3Q9Y4R7 772 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 C2orf78A6NCI8 922 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 SDR42E2A6NKP2 422 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 SUN1O94901 812 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 AP2A1O95782 977 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 NDST2P52849 883 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 EPHB3P54753 998 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 CRADDP78560 199 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 GALNTL6Q49A17 601 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 ACBD5Q5T8D3 534 aaPredicted RBP20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 ADGRD1Q6QNK2 874 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 MCOLN1Q9GZU1 580 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 MLXIPLQ9NP71 852 aa20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 IPO11Q9UI26 975 aaKnown RBP20.69■□□□□ 0.9
RIPPLY3-201ENST00000329553 RASA4BC9J798 803 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 RASA4O43374 803 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 USP12O75317 370 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 TACR2P21452 398 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 MGAT1P26572 445 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 MSH2P43246 934 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 TMEM150AQ86TG1 271 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 TRABD2AQ86V40 505 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 LRRC49Q8IUZ0 686 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 ARNTL2Q8WYA1 636 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 PSMG2Q969U7 264 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 HMCESQ96FZ2 354 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 UBP1Q9NZI7 540 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 PRKAG3Q9UGI9 489 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 CACNG3O60359 315 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 ACSL4O60488 711 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 SLC6A4P31645 630 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 HARS2P49590 506 aaKnown RBP20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 MTA1Q13330 715 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 FAM133BQ5BKY9 247 aaKnown RBP20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 OR52K1Q8NGK4 314 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 GDAP1Q8TB36 358 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 DCAKDQ8WVC6 231 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 STAMBPL1Q96FJ0 436 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 MAGEB18Q96M61 343 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 DONSONQ9NYP3 566 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 STK39Q9UEW8 545 aa20.68■□□□□ 0.9
RIPPLY3-201ENST00000329553 ANAPC1Q9H1A4 1944 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 CFAP73A6NFT4 308 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 TRDMT1O14717 391 aaKnown RBP20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 TGM5O43548 720 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 UBOX5O94941 541 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 CXCL14O95715 111 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 KLKB1P03952 638 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 KRT15P19012 456 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 STX2P32856 288 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 TIGD7Q6NT04 549 aaPredicted RBP20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 RFWD3Q6PCD5 774 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 LGI2Q8N0V4 545 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 CCDC63Q8NA47 563 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 OXNAD1Q96HP4 312 aaPredicted RBP20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 ZNF334Q9HCZ1 680 aaPredicted RBP20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 MAFFQ9ULX9 164 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 PCDHA11Q9Y5I1 949 aa20.67■□□□□ 0.9
RIPPLY3-201ENST00000329553 LCHNA4D1U4 455 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 STC2O76061 302 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 GSTA2P09210 222 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 NR1H3Q13133 447 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 CASC4Q6P4E1 433 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 TMC7Q7Z402 723 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 SPATA21Q7Z572 469 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 DENND1CQ8IV53 801 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 HERC6Q8IVU3 1022 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 C7orf61Q8IZ16 206 aa20.66■□□□□ 0.9
RIPPLY3-201ENST00000329553 CFAP52Q8N1V2 620 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms