RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CCDC117Q8IWD4 279 aaPredicted RBP18.21■□□□□ 0.51
RAB39A-201ENST00000320578 MPP5Q8N3R9 675 aa18.21■□□□□ 0.51
RAB39A-201ENST00000320578 KLHL5Q96PQ7 755 aa18.21■□□□□ 0.51
RAB39A-201ENST00000320578 EMILIN2Q9BXX0 1053 aa18.21■□□□□ 0.51
RAB39A-201ENST00000320578 IL21Q9HBE4 155 aa18.21■□□□□ 0.51
RAB39A-201ENST00000320578 PRDM10Q9NQV6 1147 aa18.21■□□□□ 0.51
RAB39A-201ENST00000320578 SMG5Q9UPR3 1016 aaKnown RBP18.21■□□□□ 0.51
RAB39A-201ENST00000320578 KIAA1671Q9BY89 1806 aa18.21■□□□□ 0.5
RAB39A-201ENST00000320578 IQANK1A0A1B0GTG1 560 aa18.2■□□□□ 0.5
RAB39A-201ENST00000320578 PRPF4O43172 522 aaKnown RBP eCLIP18.2■□□□□ 0.5
RAB39A-201ENST00000320578 TGM5O43548 720 aa18.2■□□□□ 0.5
RAB39A-201ENST00000320578 GEMP55040 296 aa18.2■□□□□ 0.5
RAB39A-201ENST00000320578 UBE3AQ05086 875 aa18.2■□□□□ 0.5
RAB39A-201ENST00000320578 CHST9Q7L1S5 443 aa18.2■□□□□ 0.5
RAB39A-201ENST00000320578 ZNF771Q7L3S4 317 aaPredicted RBP18.2■□□□□ 0.5
RAB39A-201ENST00000320578 MZB1Q8WU39 189 aa18.2■□□□□ 0.5
RAB39A-201ENST00000320578 ALKBH8Q96BT7 664 aaKnown RBP18.2■□□□□ 0.5
RAB39A-201ENST00000320578 HMCESQ96FZ2 354 aa18.2■□□□□ 0.5
RAB39A-201ENST00000320578 ZNF599Q96NL3 588 aa18.2■□□□□ 0.5
RAB39A-201ENST00000320578 MTIF3Q9H2K0 278 aaKnown RBP18.2■□□□□ 0.5
RAB39A-201ENST00000320578 INTS9Q9NV88 658 aaKnown RBP18.2■□□□□ 0.5
RAB39A-201ENST00000320578 RBM22Q9NW64 420 aaKnown RBP eCLIP18.2■□□□□ 0.5
RAB39A-201ENST00000320578 IKBKGQ9Y6K9 419 aa18.2■□□□□ 0.5
RAB39A-201ENST00000320578 DOCK4Q8N1I0 1966 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 TMEM120BA0PK00 339 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 INHBAP08476 426 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 KRT15P19012 456 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 MGAT1P26572 445 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 CDH17Q12864 832 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 SERINC3Q13530 473 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 POLD3Q15054 466 aaPredicted RBP18.19■□□□□ 0.5
RAB39A-201ENST00000320578 LGSNQ5TDP6 509 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 TTC39BQ5VTQ0 682 aaPredicted RBP18.19■□□□□ 0.5
RAB39A-201ENST00000320578 TMC7Q7Z402 723 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 TFAP2DQ7Z6R9 452 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 SRRM1Q8IYB3 904 aaKnown RBP18.19■□□□□ 0.5
RAB39A-201ENST00000320578 LGI2Q8N0V4 545 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 MDM1Q8TC05 714 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 NSMCE1Q8WV22 266 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 ATXN2LQ8WWM7 1075 aaKnown RBP18.19■□□□□ 0.5
RAB39A-201ENST00000320578 OXNAD1Q96HP4 312 aaPredicted RBP18.19■□□□□ 0.5
RAB39A-201ENST00000320578 RNF38Q9H0F5 515 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 SLC25A51Q9H1U9 297 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 MAGEH1Q9H213 219 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 NUP205Q92621 2012 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 GOLGA6L7A0A1B0GV03 622 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 CLDN11O75508 207 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 POLBP06746 335 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 OR1E1P30953 314 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 SESN2P58004 480 aaPredicted RBP18.19■□□□□ 0.5
RAB39A-201ENST00000320578 EFTUD2Q15029 972 aaKnown RBP eCLIP18.19■□□□□ 0.5
RAB39A-201ENST00000320578 SPANXN3Q5MJ09 141 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 ADGRF1Q5T601 910 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 PRPF39Q86UA1 669 aaKnown RBP18.19■□□□□ 0.5
RAB39A-201ENST00000320578 OR52K1Q8NGK4 314 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 SGSM3Q96HU1 749 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 SMC6Q96SB8 1091 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 IL22Q9GZX6 179 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 TRABDQ9H4I3 376 aa18.19■□□□□ 0.5
RAB39A-201ENST00000320578 KLKB1P03952 638 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 HLA-DQB2P05538 268 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 CORO1AP31146 461 aaKnown RBP18.18■□□□□ 0.5
RAB39A-201ENST00000320578 SLC6A4P31645 630 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 SERPINB9P50453 376 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 MPP3Q13368 585 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 MARC1Q5VT66 337 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 TTC19Q6DKK2 380 aaPredicted RBP18.18■□□□□ 0.5
RAB39A-201ENST00000320578 OTOP3Q7RTS5 596 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 TMEM135Q86UB9 458 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 LRRC3Q9BY71 257 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 SP110Q9HB58 689 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 ZNF334Q9HCZ1 680 aaPredicted RBP18.18■□□□□ 0.5
RAB39A-201ENST00000320578 ENTPD7Q9NQZ7 604 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 VPS45Q9NRW7 570 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 SYBUQ9NX95 663 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 SAMD15Q9P1V8 674 aa18.18■□□□□ 0.5
RAB39A-201ENST00000320578 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.17■□□□□ 0.5
RAB39A-201ENST00000320578 FAM237BA0A1B0GVD1 139 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 C2orf78A6NCI8 922 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 GMNCA6NCL1 334 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 FAM47DPA6NHR8 397 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 F5H423 210 aaPredicted RBP18.17■□□□□ 0.5
RAB39A-201ENST00000320578 H3BNC9 293 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 TLL1O43897 1013 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 NEBLO76041 1014 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 LRG1P02750 347 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 CREB1P16220 341 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 CNTFP26441 200 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 ADRA1AP35348 466 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 SPARCL1Q14515 664 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 GLIPR1L2Q4G1C9 344 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 SETD3Q86TU7 594 aaPredicted RBP18.17■□□□□ 0.5
RAB39A-201ENST00000320578 DENND1CQ8IV53 801 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 MRPL43Q8N983 215 aaKnown RBP18.17■□□□□ 0.5
RAB39A-201ENST00000320578 USP33Q8TEY7 942 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 CDKL2Q92772 493 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 MTBPQ96DY7 904 aa18.17■□□□□ 0.5
RAB39A-201ENST00000320578 ZNF419Q96HQ0 510 aaPredicted RBP18.17■□□□□ 0.5
RAB39A-201ENST00000320578 ZFRQ96KR1 1074 aaKnown RBP18.17■□□□□ 0.5
RAB39A-201ENST00000320578 AGO1Q9UL18 857 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms