RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 AP3B1O00203 1094 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 SIN3BO75182 1162 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 CPA3P15088 417 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 HTR7P34969 479 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 DSC3Q14574 896 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 KCNMB4Q86W47 210 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 MYLK4Q86YV6 388 aaPredicted RBP14.06□□□□□ -0.16
ATG4C-201ENST00000317868 SCUBE1Q8IWY4 988 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 EDEM1Q92611 657 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 AZIN2Q96A70 460 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 FAM136AQ96C01 138 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 PANX3Q96QZ0 392 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 TXNDC16Q9P2K2 825 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 TTC3P53804 2025 aa14.06□□□□□ -0.16
ATG4C-201ENST00000317868 ARHGAP42A6NI28 874 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 M0QZ92 97 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 TIMM44O43615 452 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 KLHL2O95198 593 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 ODC1P11926 461 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 CCNCP24863 283 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 ACTR3P61158 418 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 TRMT5Q32P41 509 aaKnown RBP14.05□□□□□ -0.16
ATG4C-201ENST00000317868 CST9Q5W186 159 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 AFMIDQ63HM1 303 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 NAPRTQ6XQN6 538 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 URGCPQ8TCY9 931 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 IL12RB2Q99665 862 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 AGO3Q9H9G7 860 aaKnown RBP14.05□□□□□ -0.16
ATG4C-201ENST00000317868 CHRAC1Q9NRG0 131 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 SLC7A8Q9UHI5 535 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 GBF1Q92538 1859 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 A0A088AWK7 358 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 CASTOR2A6NHX0 329 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 IRAK2O43187 625 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 SMNDC1O75940 238 aaKnown RBP eCLIP14.05□□□□□ -0.16
ATG4C-201ENST00000317868 SBK3P0C264 359 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 C6orf222P0C671 652 aaPredicted RBP14.05□□□□□ -0.16
ATG4C-201ENST00000317868 HADHAP40939 763 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 IRF9Q00978 393 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 CDH17Q12864 832 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 MPP3Q13368 585 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 HSP90AA5PQ58FG0 334 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 NAPEPLDQ6IQ20 393 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 RASAL3Q86YV0 1011 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 ACVR1CQ8NER5 493 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 PPP1R14CQ8TAE6 165 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 ZNF212Q9UDV6 495 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 DNAJB4Q9UDY4 337 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 THSD7BQ9C0I4 1608 aa14.05□□□□□ -0.16
ATG4C-201ENST00000317868 A0A096LPK6 155 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 INPPL1O15357 1258 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 PSMD3O43242 534 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 MGEA5O60502 916 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 DNAJB1P25685 340 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 NMBRP28336 390 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 KDSRQ06136 332 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 ITGA9Q13797 1035 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 ANO7Q6IWH7 933 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 EPGNQ6UW88 154 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 LCA5Q86VQ0 697 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 GPATCH11Q8N954 259 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 OR10T2Q8NGX3 314 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 VPS39Q96JC1 886 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 FAM161BQ96MY7 647 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 FCRL5Q96RD9 977 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 HAPLN3Q96S86 360 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 GPAMQ9HCL2 828 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 DMAP1Q9NPF5 467 aaPredicted RBP14.04□□□□□ -0.16
ATG4C-201ENST00000317868 H2AFYO75367 372 aaKnown RBP14.04□□□□□ -0.16
ATG4C-201ENST00000317868 C2P06681 752 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 CYBAP13498 195 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 PAX3P23760 479 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 CTGFP29279 349 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 BRMS1LQ5PSV4 323 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 SNX30Q5VWJ9 437 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 DENND5AQ6IQ26 1287 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 LRRC74BQ6ZQY2 392 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 LINC00523Q86TU6 105 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 ZC3HC1Q86WB0 502 aaKnown RBP14.04□□□□□ -0.16
ATG4C-201ENST00000317868 DNAAF3Q8N9W5 541 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 PPP4R1Q8TF05 950 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 DNAJC9Q8WXX5 260 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 RILPQ96NA2 401 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 TRIM62Q9BVG3 475 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 OXCT2Q9BYC2 517 aaPredicted RBP14.04□□□□□ -0.16
ATG4C-201ENST00000317868 CDH19Q9H159 772 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 NSMCE4AQ9NXX6 385 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 APOBEC2Q9Y235 224 aaKnown RBP14.04□□□□□ -0.16
ATG4C-201ENST00000317868 ANKRD6Q9Y2G4 727 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 A6NHS1 94 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.04□□□□□ -0.16
ATG4C-201ENST00000317868 TARM1B6A8C7 271 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 TNFRSF10BO14763 440 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 RPLP2P05387 115 aaKnown RBP14.04□□□□□ -0.16
ATG4C-201ENST00000317868 PRDX6P30041 224 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 ADRA1AP35348 466 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 COG7P83436 770 aa14.04□□□□□ -0.16
ATG4C-201ENST00000317868 NRG1Q02297 640 aaPredicted RBP14.04□□□□□ -0.16
ATG4C-201ENST00000317868 THOC5Q13769 683 aaKnown RBP14.04□□□□□ -0.16
ATG4C-201ENST00000317868 RCN2Q14257 317 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms